Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0176 |
Symbol | rpsC |
ID | 4017858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 199704 |
End bp | 200393 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954152 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_561196 |
Protein GI | 91791545 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000179507 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACAGA AAGTACATCC TAATGGTATC CGTCTGGGTA TCACCAAGCC TTGGATCTCG ACCTGGTACG CCGATAAATC AGATTATGCA AATAATCTGA ACAGCGACTG GGAAGTGCGT CAATATTTAA CTGAAAAGTT AAAAGCCGCA TCGGTATCTA AGATTGTTAT CGAACGTCCA GCGAAAAGCA TCCGCGTTAC GATTCACACT GCCCGTCCAG GCGTTGTGAT TGGTAAGAAA GGTGAAGACG TTGAAGTATT ACGTGCTCAA GTGGCTAAAA TCACTGGCAC TACTGCTCAA ATCAACATCG CTGAGATCCG TAAGCCTGAA TTAGACGCTA AGCTCGTTGC TGACTCTATT GCTCAGCAGT TAGAGCGTCG TGTTATGTTC CGTCGCGCTA TGAAGCGTGC AGTACAGAAC GCAATGCGCA TTGGTGCTCA AGGTATCAAA GTTGAAGTTA GCGGCCGTTT AGGTGGTGCT GAAATCGCGC GTTCTGAGTG GTATCGTGAA GGTCGTGTAC CTTTGCATAC TCTACGTGCT GATATCGACT ATTCGACTTC TGAAAGTCAC ACGCAATACG GTGTGATTGG TGTTAAAGTT TGGATCTTCA AAGGTGAAGT TCTAGACGGT TTAGTACCAC AGATCGAAGA GCCTAAGCAG CAACCTAAGC GTAAGCCTCG TGCTAAATAG
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Protein sequence | MGQKVHPNGI RLGITKPWIS TWYADKSDYA NNLNSDWEVR QYLTEKLKAA SVSKIVIERP AKSIRVTIHT ARPGVVIGKK GEDVEVLRAQ VAKITGTTAQ INIAEIRKPE LDAKLVADSI AQQLERRVMF RRAMKRAVQN AMRIGAQGIK VEVSGRLGGA EIARSEWYRE GRVPLHTLRA DIDYSTSESH TQYGVIGVKV WIFKGEVLDG LVPQIEEPKQ QPKRKPRAK
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