Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0173 |
Symbol | rplB |
ID | 4017855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 198225 |
End bp | 199049 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954149 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_561193 |
Protein GI | 91791542 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000399734 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGTTA TTAAGTGTAA GCCAACCTCT CCAGGTCGTC GCCACGTAGT TAAAGTGGTG AATACAGACT TGCATAAGGG TAAACCTTTT GCAGCGCTGT TGGCGAAAAA ATCTAAAAGT GGTGGCCGTA ACAATACTGG CCGTATCACT GTCCGTCACG TTGGTGGTGG TCACAAGCAG CATTACCGTC TAATTGACTT CAAACGCAAT AAAGATGGTA TTCCTGCAAA AGTTGAACGT ATTGAATATG ATCCAAACCG TACAGCGCAC ATCGCGTTAG TACTGTACGC CGATGGTGAG CGTCGCTATA TTCTTGCTGC TAAAGGCATG AAGTCAGGCG ATCCAATCCA ATCAGGCGTT GGTTCAGAAA TCAAGACTGG CAACTCTATG CCTCTGCGCA ACATCCCTGT GGGATCTGTT GTTCACGCTG TCGAAATGAA GCCTGGTAAA GGTGCTCAAA TCGCGCGTTC TGCAGGTGCA TACGTGCAAG TTATTGCTCG TGATGGCGCA TATGCAACTC TACGTCTTCG CTCTGGCGAA ATGCGTAAAG TTCCAGTTGA TTGCCGCGCG ACATTTGGTG AAGTTGGTAA TGCCGAGCAC ATGCTACGCC AGTTAGGCAA AGCAGGTGCC AAGCGCTGGA GAGGCGTACG CCCTACAGTT CGTGGTGTTG CAATGAACCC GGTAGATCAC CCACACGGTG GTGGTGAAGG TCGTACTTCT GGTGGACGTC ATCCAGTGAG TCCATGGGGT GTGCCAACTA AGGGTTATAA AACTCGTAGT AACAAGCGCA CTGACAAGTA CATTGTACGT CGTCGTAATA AATAA
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Protein sequence | MAVIKCKPTS PGRRHVVKVV NTDLHKGKPF AALLAKKSKS GGRNNTGRIT VRHVGGGHKQ HYRLIDFKRN KDGIPAKVER IEYDPNRTAH IALVLYADGE RRYILAAKGM KSGDPIQSGV GSEIKTGNSM PLRNIPVGSV VHAVEMKPGK GAQIARSAGA YVQVIARDGA YATLRLRSGE MRKVPVDCRA TFGEVGNAEH MLRQLGKAGA KRWRGVRPTV RGVAMNPVDH PHGGGEGRTS GGRHPVSPWG VPTKGYKTRS NKRTDKYIVR RRNK
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