| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0172 |
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| Symbol | rplW |
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| ID | 4017854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 197906 |
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| End bp | 198208 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954148 |
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| Product | 50S ribosomal protein L23 |
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| Protein accession | YP_561192 |
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| Protein GI | 91791541 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0089] Ribosomal protein L23 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000243767 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCCGCG AAGAACGTTT GCTAAAAGTT ATTCTAGCTC CGCACATCTC TGAAAAGAGC
ACTGTGGTTG CTGAGAAGAC AAACACTGTT GTTTTCCGCG TAGCAATCGA TGCGACTAAA
GCAGAGATTA AAGCTGCTGT TGCGAAGCTA TTTGAAGTTG AAGTAGATTC AGTTCGCACT
CTAGTAAACA AAGGCAAAAC TAAGCGTACC GGTGGCCGTG TAGGTCGTCG TAGCGATTGG
AAAAAAGCTT ATGTTACTTT AGCTGCTGGT GCTGACATCG ATTTCGTCGG CGGCGCTGAG
TAA
|
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| Protein sequence | MIREERLLKV ILAPHISEKS TVVAEKTNTV VFRVAIDATK AEIKAAVAKL FEVEVDSVRT
LVNKGKTKRT GGRVGRRSDW KKAYVTLAAG ADIDFVGGAE
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