| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0165 |
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| Symbol | rpsL |
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| ID | 4017847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 191615 |
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| End bp | 191989 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954141 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_561185 |
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| Protein GI | 91791534 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000589821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACTG TAAACCAGTT GGTACGTAAG CCACGCGCGC CAAAAGTCGA AAAGACTAAT
GTGCCAGCGT TGAATGCGTG CCCACAGAAG CGTGGTGTTT GTACTCGTGT GTACACTACT
ACCCCTAAAA AACCTAACTC TGCACTACGT AAAGTAGCGC GTGTGCGTCT AACTAACGGT
TTCGAAGTTA CTTCGTATAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CAGTGTTATC
CTAATCCGTG GTGGTCGTGT TAAAGACTTA CCAGGTGTGC GTTATCACAC AGTTCGTGGC
GCACTAGACT GTGCCGGCGT GAATACACGT CGTCAAGGTC GCTCTAAGTA CGGTGCTAAG
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATVNQLVRK PRAPKVEKTN VPALNACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCAGVNTR RQGRSKYGAK
RPKS
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