| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0162 |
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| Symbol | rplL |
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| ID | 4017826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 182490 |
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| End bp | 182858 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637954138 |
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| Product | 50S ribosomal protein L7/L12 |
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| Protein accession | YP_561182 |
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| Protein GI | 91791531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0222] Ribosomal protein L7/L12 |
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| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000100689 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTATCA CTAAAGACCA AATCTTAGAA GCCTTTGCAG CTATGTCTGT AATGGACGTT
GTTGAACTAA TCGAAGCAAT GGAAGAGAAG TTCGGCGTTT CTGCCGCTGC TGCTACTGTT
GCTGTTGGCG GTGACGCTGG CGCTGCTGCT GAAGAGCAGA CAGAATTCGA CGTAGTTATG
ACTTCACACG GTGACAACAA AGTTGCTGTA ATTAAAGCCG TTCGTGGCGC TACAGGTCTA
GGCCTGAAAG AAGCTAAGAC TATGGCTGAA TCTTCTCCAA TCGCCATCAA AGAAGGCGTT
TCTAAAGAAG AAGCTGAAGC ACTTAAGAAA GATTTAGAAG CAGCTGGTGC TGTTGTTGAA
ATCAAGTAA
|
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| Protein sequence | MSITKDQILE AFAAMSVMDV VELIEAMEEK FGVSAAAATV AVGGDAGAAA EEQTEFDVVM
TSHGDNKVAV IKAVRGATGL GLKEAKTMAE SSPIAIKEGV SKEEAEALKK DLEAAGAVVE
IK
|
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