| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0159 |
|---|
| Symbol | rplK |
|---|
| ID | 4017823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 180516 |
|---|
| End bp | 180944 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637954135 |
|---|
| Product | 50S ribosomal protein L11 |
|---|
| Protein accession | YP_561179 |
|---|
| Protein GI | 91791528 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0080] Ribosomal protein L11 |
|---|
| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000114645 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AAATTGAAGC TTATATTAAG CTACAAGTTA AATCTGGTTC TGCTAACCCT
TCACCACCAG TTGGTCCAGC TTTGGGTCAA AAAGGTGTGA ACATCATGGA ATTCTGTAAA
GCGTTCAACG CACGTACAGA AAAAATGGAA AAGGGCATGC CAATTCCAGT GGTAATCACT
GTATACAGCG ATCGTTCATT CACGTTCGAA ACTAAGACGC CTCCAGCATC TTACTTACTG
CTTAAAGCAG CGAACTTGAA GTCTGGTTCT GCTCGTCCGA ACACAGTAAA AGTAGGTACT
ATCAAGCGTA ACGCTGTGCA AGAAATTGCA GAGCTGAAAG CAGCTGATAT GACTGGCGCC
GATGTTGAAG CGATGACTCG CACAATTGAA GGCACTGCAC GTTCAATGGG TTTGGTAGTA
GAGGACTAA
|
|---|
| Protein sequence | MAKKIEAYIK LQVKSGSANP SPPVGPALGQ KGVNIMEFCK AFNARTEKME KGMPIPVVIT
VYSDRSFTFE TKTPPASYLL LKAANLKSGS ARPNTVKVGT IKRNAVQEIA ELKAADMTGA
DVEAMTRTIE GTARSMGLVV ED
|
|---|
| |