Gene Sden_0158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0158 
Symbol 
ID4017822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp179836 
End bp180387 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID637954134 
Producttranscription termination/antitermination factor NusG 
Protein accessionYP_561178 
Protein GI91791527 
COG category[K] Transcription 
COG ID[COG0250] Transcription antiterminator 
TIGRFAM ID[TIGR00922] transcription termination/antitermination factor NusG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000171251 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAG CTAAAGAAGT TAAGAAAAGA TGGTATGTGA TCCAAGCTTT TTCTGGGTAT 
GAAGGTCGTG TATCTAAAAC CCTGCTTGAA CATATCAAAA TGCACAACAT GGAAGACTAT
TTCGGTGAGA TTTTAGTTCC TACCGAAGAA GTGGTTGAAA TGCGTGCAGG TCAGCGCCGC
AAGAGTGAGC GTAAGTTCTT TCCTGGTTAC GTATTAGTTC AGATGGAAAT GAACGATGAC
AGCTGGCACT TAGTGAAAAG TATCCCGCGT GTAATGGGTT TCATTGGTGG CACTTCAGAT
CGTCCAGCAC CGATTTCTGA TAAAGAAGCC GATGCAATCC TGCAGCGTCT ACAAGACACT
GTTGAGTCGC CTACTCACCG TATCATTTAC GAGCCAGGTG AAGTTGTTCG CGTTTGTGAC
GGTCCATTTG CTGACTTTAA CGGTACCGTT GAAGAAGTGG ATTACGAGAA GAATCGCGTT
AAGGTGTCGG TAATGATCTT CGGTCGTTCG ACTCCAGTGG AATTAGATTT TCATCAAGTT
GAAAAAAGCT GA
 
Protein sequence
MTEAKEVKKR WYVIQAFSGY EGRVSKTLLE HIKMHNMEDY FGEILVPTEE VVEMRAGQRR 
KSERKFFPGY VLVQMEMNDD SWHLVKSIPR VMGFIGGTSD RPAPISDKEA DAILQRLQDT
VESPTHRIIY EPGEVVRVCD GPFADFNGTV EEVDYEKNRV KVSVMIFGRS TPVELDFHQV
EKS