Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0152 |
Symbol | |
ID | 4017813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 173414 |
End bp | 174934 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637954125 |
Product | PKD |
Protein accession | YP_561172 |
Protein GI | 91791521 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000535415 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA CATCTTATCT AGTATTTCCT TTTATCTCGC TTAGTTTAAT CGCTTGCGGT GGCGGATCCA GTGACAGCAC GCCAGCTGTA TCCATAGCCG AGAATAATGC GCCGACAGCT AGAGTTTCAT TAGACAACAC TTCAGTTAAC ATGGGCGATC TTGTATTAGT TCAAGGTGGT CAAAGTAGTG ACCCTGATAG TGATAGCTTA AGTTACCTGT GGCAGGTTAC CGATCCTCAA GGCGCGACGT TGGCCTTAAA TGATGCGAGT AATAAACAGC TAAGCTTTAA CGTAGTCATG GCTGGAGAGT ATCAAGTAAG CTTGACGGTC AGCGATGGTA AAGGCGCAAA TGACAAGGCA AGTTTAGTAC TGAAAGTTGC AGGGGCTAAA GCGATTACCG CTGTTATTTC TGCTGCTGCA ACGGTAAAAC AGGGCAATAG TGTGACGCTT TCAGGGGAAA GCAGTAGGCT AAAAACAGAC ACTCGCTTTA GCTGGAGTTT GTTAGAAAAA CCTGCAGCCA GTGAGGCAGT GCTGACTAGT ATAGATACAG TGGAAACGTA TTTTACCGCC GACAAGTTGG GCGAATATAA GGTGCAATTA AGCCTGAAAG ATCAAGATAA TAATACCGAT GTGGCTCAAA GTGTGATCAC CGCCACTAGC GTTACTAGTA ATACGGCTCC AGTGGCATCG ATTACAGCTG CGAGTACAGT GCTTAAAGTT AATGAAGAGC TCACTTTGTC TGCGGCTCAA AGTACTGATG CTGATGGCGA TACGTTAAGT TTCAGCTGGC AGGTGATTCA AAAACCGGAC AATGCCAATG TCAAACTGGA ACAGGCAACA ACGCAGCTAG CTAAGTTTAG CGCGAGTTCT TTAGGTGAGT ATCATGTGGA GCTGACTGTC AGTGATGGTA AGCTACAAGG TAAAAAACAA CTGAAATTAC AGGTGACATC GACTAATCGA GCCCCTGTTG TCAGCATTAA TCTAAACCAA AACTCACCTA AGCAAGGTGA AACCATTAAC TTGCAAGGCG TGGGAGTCGA CCCTGACAAT GATAGCTTAC GTTATACGTG GAGCTTAGTG TCTAAACCTA GTGATAGTAG CAGCGAATTT TCCAGCCCAA CCCAGCAGAA TACTCAGTTA TACCTAGATG CCAAAGGGGA TTATCTAGTA TCACTGATTG CCACAGATAA TGAGTTAACG TCAGAGCCCG CCACTAAAAA AATTAGTGTG GCCGTTAATC ATCCACCAGT GATCACTAAG GTGCTATACG ACATTCAGGT AACAGCGGGC TCCCCCACTA AGCTTGAAGC ACTTGCAACG GATCCTGAAG GTCAACCTAT GACTTTTGAG TGGCGTTTGG TGGATAAAGA TCCTGGCACT AATGGCACAT TTAGTGCTCC TACTCAGCCA GTGACCGAAT TTACACCGGA TCTACCAGGT TGGTATACCT TGCAAGTCAG CGTCAGTGAT GGCATACAAA AATCCCTACT TCCTACCACA TTACTGATCA TGGCAAAGTA A
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Protein sequence | MKITSYLVFP FISLSLIACG GGSSDSTPAV SIAENNAPTA RVSLDNTSVN MGDLVLVQGG QSSDPDSDSL SYLWQVTDPQ GATLALNDAS NKQLSFNVVM AGEYQVSLTV SDGKGANDKA SLVLKVAGAK AITAVISAAA TVKQGNSVTL SGESSRLKTD TRFSWSLLEK PAASEAVLTS IDTVETYFTA DKLGEYKVQL SLKDQDNNTD VAQSVITATS VTSNTAPVAS ITAASTVLKV NEELTLSAAQ STDADGDTLS FSWQVIQKPD NANVKLEQAT TQLAKFSASS LGEYHVELTV SDGKLQGKKQ LKLQVTSTNR APVVSINLNQ NSPKQGETIN LQGVGVDPDN DSLRYTWSLV SKPSDSSSEF SSPTQQNTQL YLDAKGDYLV SLIATDNELT SEPATKKISV AVNHPPVITK VLYDIQVTAG SPTKLEALAT DPEGQPMTFE WRLVDKDPGT NGTFSAPTQP VTEFTPDLPG WYTLQVSVSD GIQKSLLPTT LLIMAK
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