| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0151 |
|---|
| Symbol | |
|---|
| ID | 4020398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 171849 |
|---|
| End bp | 173111 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637954124 |
|---|
| Product | gamma-glutamyl phosphate reductase |
|---|
| Protein accession | YP_561171 |
|---|
| Protein GI | 91791520 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0014] Gamma-glutamyl phosphate reductase |
|---|
| TIGRFAM ID | [TIGR00407] gamma-glutamyl phosphate reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATC AATCTTTAAG TTTAATAGAA ACCTTATCTC GTGATGCTGC AACAGCGGCG
CAAACCTTAG CGGTATTAGA TGAGCAGACC AAGAATACTG TGCTGCTTGA TATGGCGAAA
TCATTACGAG CTAGCACTGC AGAAATCCTA GCGGCGAATC AGCAAGATTT AACCCGCGCC
GAGGAAGATA ACTTAGGCTC AGCCATGTTA GACAGATTAT TGCTGACCCC GGAGCGAATC
GAAGCCATGG CACAAGGCAT AGAAACTATT GTCTCACTGC CGGATCCTGT GGGGATTACT
CGTGATTTAA GCGAGCGCCC TAATGGCATT AAAATTAGAA AAATGCGCAT CCCTCTAGGG
GTGGTGTGCA TGATCTATGA GGCACGCCCA AATGTGACGG CCGATGCGGG TGCCTTGTGC
TTTAAGTCAG GCAATGCCGT GGTATTGCGT GGTGGTAAAG AAGCACTGCA ATCTAGCCTA
GTTATCGCCA AAGTGCTGCA AGCGGTATTG CAACAGCATA AGCTACCAAA AGCGCTTATC
ACAGTAATTC CCGATCCTGA CCGCGGCCTA ATGATGGAGC TGATGCAGCA GAGAGCCTAT
ATCGACGTTA TCATTCCCAG AGGCGGTGAA GGGCTGATTA ATTTCGTCAC AGATAACAGC
AAAATCCCGG TTATTCAGCA TTTTAAAGGT GTATGCCACC TGTATGTGGA CAAAGATGCC
GATTTAGATA ATGCCATGGC ATTACTGCTT AATGGCAAGA CTCAGCGTAC CGGGGTGTGT
AATGCGCTCG AAGGCTTAAT CGTCCATCAA GATGTGGCGG AGGCTTTCCT ATCAAAAGCG
GCTGTTGAGC TTGCAAGCCA CAAGGTGAAA ATTAATGCTT GTTCACGTGC TGCTAAGTAC
TTTACAGGCT GCACTGTGCT GGATGACAGC GAATTTGGCC AAGAGTATTT AGATCTTGAA
ATCGCCATTC GCATTGTCGA TGACTTTGAC CATGCAATAG ATCATATCCG CGCCTTTGGC
AGTCATCACA CCGAAGTGAT TTCGACCAAA AATGACGCCA CGGCGATGCG TTTTCAACGC
ACAGTGGATG CCTCTGTGGT TATGGTAAAC GCCTCGTCAC GCTTCTCCGA TGGCGGCGAG
CTAGGTTTAG GCGCCGAGAT TGGTATTGCC ACCTCGAAAC TGCATGCTTA CGGCCCCATG
GGGCTTGAGT CATTGACGGC AGAGAAATAC CTAGTTAACG GCACAGGTCA AGTGCGCAGC
TAA
|
|---|
| Protein sequence | MNNQSLSLIE TLSRDAATAA QTLAVLDEQT KNTVLLDMAK SLRASTAEIL AANQQDLTRA
EEDNLGSAML DRLLLTPERI EAMAQGIETI VSLPDPVGIT RDLSERPNGI KIRKMRIPLG
VVCMIYEARP NVTADAGALC FKSGNAVVLR GGKEALQSSL VIAKVLQAVL QQHKLPKALI
TVIPDPDRGL MMELMQQRAY IDVIIPRGGE GLINFVTDNS KIPVIQHFKG VCHLYVDKDA
DLDNAMALLL NGKTQRTGVC NALEGLIVHQ DVAEAFLSKA AVELASHKVK INACSRAAKY
FTGCTVLDDS EFGQEYLDLE IAIRIVDDFD HAIDHIRAFG SHHTEVISTK NDATAMRFQR
TVDASVVMVN ASSRFSDGGE LGLGAEIGIA TSKLHAYGPM GLESLTAEKY LVNGTGQVRS
|
|---|
| |