Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0135 |
Symbol | |
ID | 4020382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 149292 |
End bp | 150269 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637954108 |
Product | hypothetical protein |
Protein accession | YP_561155 |
Protein GI | 91791504 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACGCC CTAGAAGAAG TCAGGTGAGT GTGGAAGACA CTCCCATGTA CCATTGTTGT AGCCGCGTTG TTCGCCGCGC CTTTCTCTGC GGCGATGATA TGTTTTCCGG TAAAAACTAC GACCACAGAC GTGCTTGGGT AGAAGCTCAA CTGCTTAAAT TATCAGAGGT TTTCGCTATT GATGTTGCGG CCTATGCAGT GATGAGTAAC CATCTGCATG TTGTGCTCAG AATCGACATC TATCAAGCTA ACAGCTGGTC TGATGTTGAG GTAATAAGCC ATTGGCATCA GTTGTTTAAG GGTACTGACA TAACCCGAAA ATTTGCTCAG GGTGAAACGC TTGAAGATTA TGAACAGTTG CAGCTTAGTC ATACAGTTGC GTTATATCGC AGCCGATTAA GCGATATTTC TTGGTTCATG CGCTGCCTAA ACGAGCCAAT AGCACGGCAA GCAAATCAAG AGGATAACTG TACAGGCCGC TTCTGGGAAG GGCGTTTTAA GTCGCAGGCC CTGCTAGATG AGGCTGCAGT GTTAGCCTGT ATGGCCTATG TCGATCTCAA TCCAATTAGG GCCAAGATGG CAAGTACCCC TGAGCAATCA GACCACACCA GTATCCAGCT GCGGATTCAG GCGGCTTTAA AAGGTGAGCA ACCTAACAGC TTATTACCTT TCATTGGCAA CGAGCGAAAA AACCAACCTA AAGGGATTGC GTTTTCGGTG CAGGATTATC TCGAGTTGGT CGATGATACA GGGCGTATTA TTCGCAATGA CAAGCGCGGT TCAATCAGTG CTAACAGCGC TAAGTTACTC ACTCGATTGA ACATTCCACA GGATAACTGG CTCAAACTCA CCACTGAATT TGGCAAGCTA TTTCACGGAC CAGTGGGTAC GCTTCAAGAG TTGACCAGCT ATTGTGAGCA TCTAGAAAAG CGTCGACGAC ATTTCGCCAG TTGTTGTCAG CACTTAATGG CTAGTTGA
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Protein sequence | MPRPRRSQVS VEDTPMYHCC SRVVRRAFLC GDDMFSGKNY DHRRAWVEAQ LLKLSEVFAI DVAAYAVMSN HLHVVLRIDI YQANSWSDVE VISHWHQLFK GTDITRKFAQ GETLEDYEQL QLSHTVALYR SRLSDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC MAYVDLNPIR AKMASTPEQS DHTSIQLRIQ AALKGEQPNS LLPFIGNERK NQPKGIAFSV QDYLELVDDT GRIIRNDKRG SISANSAKLL TRLNIPQDNW LKLTTEFGKL FHGPVGTLQE LTSYCEHLEK RRRHFASCCQ HLMAS
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