Gene Sden_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0135 
Symbol 
ID4020382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp149292 
End bp150269 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content47% 
IMG OID637954108 
Producthypothetical protein 
Protein accessionYP_561155 
Protein GI91791504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACGCC CTAGAAGAAG TCAGGTGAGT GTGGAAGACA CTCCCATGTA CCATTGTTGT 
AGCCGCGTTG TTCGCCGCGC CTTTCTCTGC GGCGATGATA TGTTTTCCGG TAAAAACTAC
GACCACAGAC GTGCTTGGGT AGAAGCTCAA CTGCTTAAAT TATCAGAGGT TTTCGCTATT
GATGTTGCGG CCTATGCAGT GATGAGTAAC CATCTGCATG TTGTGCTCAG AATCGACATC
TATCAAGCTA ACAGCTGGTC TGATGTTGAG GTAATAAGCC ATTGGCATCA GTTGTTTAAG
GGTACTGACA TAACCCGAAA ATTTGCTCAG GGTGAAACGC TTGAAGATTA TGAACAGTTG
CAGCTTAGTC ATACAGTTGC GTTATATCGC AGCCGATTAA GCGATATTTC TTGGTTCATG
CGCTGCCTAA ACGAGCCAAT AGCACGGCAA GCAAATCAAG AGGATAACTG TACAGGCCGC
TTCTGGGAAG GGCGTTTTAA GTCGCAGGCC CTGCTAGATG AGGCTGCAGT GTTAGCCTGT
ATGGCCTATG TCGATCTCAA TCCAATTAGG GCCAAGATGG CAAGTACCCC TGAGCAATCA
GACCACACCA GTATCCAGCT GCGGATTCAG GCGGCTTTAA AAGGTGAGCA ACCTAACAGC
TTATTACCTT TCATTGGCAA CGAGCGAAAA AACCAACCTA AAGGGATTGC GTTTTCGGTG
CAGGATTATC TCGAGTTGGT CGATGATACA GGGCGTATTA TTCGCAATGA CAAGCGCGGT
TCAATCAGTG CTAACAGCGC TAAGTTACTC ACTCGATTGA ACATTCCACA GGATAACTGG
CTCAAACTCA CCACTGAATT TGGCAAGCTA TTTCACGGAC CAGTGGGTAC GCTTCAAGAG
TTGACCAGCT ATTGTGAGCA TCTAGAAAAG CGTCGACGAC ATTTCGCCAG TTGTTGTCAG
CACTTAATGG CTAGTTGA
 
Protein sequence
MPRPRRSQVS VEDTPMYHCC SRVVRRAFLC GDDMFSGKNY DHRRAWVEAQ LLKLSEVFAI 
DVAAYAVMSN HLHVVLRIDI YQANSWSDVE VISHWHQLFK GTDITRKFAQ GETLEDYEQL
QLSHTVALYR SRLSDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC
MAYVDLNPIR AKMASTPEQS DHTSIQLRIQ AALKGEQPNS LLPFIGNERK NQPKGIAFSV
QDYLELVDDT GRIIRNDKRG SISANSAKLL TRLNIPQDNW LKLTTEFGKL FHGPVGTLQE
LTSYCEHLEK RRRHFASCCQ HLMAS