Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0128 |
Symbol | |
ID | 4017212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 138410 |
End bp | 139498 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954101 |
Product | general secretion pathway protein K |
Protein accession | YP_561148 |
Protein GI | 91791497 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3156] Type II secretory pathway, component PulK |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCCCGA GTAAGCAGCG CGGCGTCGCG TTAATCACTG TGATATTGAT AGTGGCCATG GTGGTTATCA TAGCCACTAA CATCAGTGCT CGTAACCAGC TGTCCATGCG CCGCACTATG AACTTAACCC AATATGATCA AGCCTATTGG TATGCCTTAT CGGCAGAAGA GCTAACCAAA AAAGTATTAA AGCAAGATTT AGACGACAGC AAAGGCATAG TCCATAGGCA ACAGTTTTGG GCCTTGGCCG ATGTGGTGTT CCCTGCCGAA TACGGTGAAA TTGTCGGCCA GGTGAGTGAT ATGCGCGCCT GCTTTAATCT TAATGCCTTG GCGGCGGTAT CAAAAAGTAA TGACAATGGT CAGCCAAAGT TACCCTTAGC GGCTAAGCAA TTTAAAGCCC TGCTAGTGGG GTTGGGCATG GATGATTTTG CCGCCGAGCG CTTGACTCAC ACCCTAAAGG ATTATGTGGA TGCCGACAGC ATCAATAGCC CCTATGGCGC CGAAGATGCG GAGTACGAGT CACGAAATGT GCCTTATCGT GCCGCTAATA CCTTGATGAA TCATAAAAGT GAGCTCAGGG CAGTATTAGG TTTTACCAAA GAAGTGTACC GGCATTTAGG GCCATTAGTG TGCGCCATCC CAGGTAACGA CAGGCAATTA TTGAATGTAA ATACCTTAGA AATTGAACAG GCACCTTTGT TAATGGCCAT GTTTGATAAC CAAATATCCT TAGGCGAAGC CGAGAATATC ATAGGCCAAG TGCCTGCCAG TGGTTATGAG AAGATAGATG AGTTTTGGCA AAACTCATCT ATTGTGGGCT TGAAGGTGGA TGCCGATGCA AAATCGAGCT TTGTTATCGA CAGTGACTAT TTCTTGCTAA AAGCGGGTGC TAAGGTGAAC GAAGCCATTT TTAGAATGGA GTCTGTGCTG AAAAAAGGCT CTGGTAATTC CATGGACGTG TTAACACGTC AGTATGGCAA TCAAGATTTT TATGCCAGCC CAAATGCCAG TAGCAGTACA AATAGTAGCA GCGAGCGCAG CACCAATAAT AACTCGAATA ACACAAATGA AAACAATAAC AAGCGCTAG
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Protein sequence | MGPSKQRGVA LITVILIVAM VVIIATNISA RNQLSMRRTM NLTQYDQAYW YALSAEELTK KVLKQDLDDS KGIVHRQQFW ALADVVFPAE YGEIVGQVSD MRACFNLNAL AAVSKSNDNG QPKLPLAAKQ FKALLVGLGM DDFAAERLTH TLKDYVDADS INSPYGAEDA EYESRNVPYR AANTLMNHKS ELRAVLGFTK EVYRHLGPLV CAIPGNDRQL LNVNTLEIEQ APLLMAMFDN QISLGEAENI IGQVPASGYE KIDEFWQNSS IVGLKVDADA KSSFVIDSDY FLLKAGAKVN EAIFRMESVL KKGSGNSMDV LTRQYGNQDF YASPNASSST NSSSERSTNN NSNNTNENNN KR
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