Gene Sden_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0126 
Symbol 
ID4017210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp137306 
End bp137671 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content48% 
IMG OID637954099 
Productgeneral secretion pathway protein I 
Protein accessionYP_561146 
Protein GI91791495 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTA CTAAAGGCAT GACCTTATTA GAAGTCATCG TTGCTTTGGC GGTGTTTTCC 
ATCGCCGCTG TGGCCGTGAC TAAAAGCTTG GGTGAACAGA TGGCTAATAT GCCCATCTTG 
GAAGAGCGCA CCTTGGCACA ATGGGTTGCC AGTAATCAGA TGGTCGAAGC CAGACTCACT 
AGCGAATTCC CAGATATTGG CCAGAAAGAA GGCCAAGTGG AGCTTGCCGG TAAGCAATGG 
TATTGGCGCC AGAATGTGGT CAAAACCACA GACGATAAGT TTCGCCAAAT TCGCATTAGT 
GTCAGCGATG ACGACAGGTA TAAACGTATC CAAGCCCAGT TGAGCAGCTA TGTACATCAA 
AAGTAA
 
Protein sequence
MKRTKGMTLL EVIVALAVFS IAAVAVTKSL GEQMANMPIL EERTLAQWVA SNQMVEARLT 
SEFPDIGQKE GQVELAGKQW YWRQNVVKTT DDKFRQIRIS VSDDDRYKRI QAQLSSYVHQ 
K