Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0118 |
Symbol | hslO |
ID | 4017202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 128791 |
End bp | 129657 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637954091 |
Product | Hsp33-like chaperonin |
Protein accession | YP_561138 |
Protein GI | 91791487 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1281] Disulfide bond chaperones of the HSP33 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.218229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG ATATTTTACA CCGTTACCTG TTTGATAATG CCGATGTTCG CGGCCAATTA GTCCAGCTTG AAGACAGTTT TCAAGCCATG TTAGCCGCCC AAGACTACCC TAAAGCGCTG CAGGTATTGT TAGGCGAGCT GATGGCTGCC ACTTCGCTGC TCACTGCAAC CATCAAATTC AGTGGTGATA TTAGTGTTCA ACTGCAAGGT GATGGTCCTG TGTCATTGGC GGTTATCAAT GGTAATAATG AACTGCAGCT GCGCGGTGTT GCCCGCTGGA AAGGCGAACT TGCTAAAGAT GCCAGCTTGC CGACTTTACT GGGCAAAGGC TATATGGTGA TTACCCTGAC CCCAGATGAA GGTGAGCGAT ATCAAGGCAT AGTCTCTTTA GAGCACGGTA CCTTGGCCGC CTGTTTAGAA GAATATTTCA ATCAGTCCGA ACAATTGCCG ACCCAAATCC ACTTATTCGC CACAAACGCG CAAGCCGCCG GCATGCTGCT GCAAGTTTTG CCGAGCAAGC AAGAGCAAAA TGATGATTTC AGTCATTTGT CAGTGCTGAC TCAAACGATT AAGCCTCAAG AGTTATTCGA CCTAGGCGCT GAAGAAGTAT TGCACCGCTT ATATCATGAG GAAGAGGTCA GGTTATTCGA GCCCATGGAT GTCAGCTTTA AATGTACTTG CTCACGAGAG CGCAGTGCTG GCGCCCTTAA AACCTTAAGT CTTGTAGAGC TTGAGACCAT ATTAGCCGAA GAAGGCAAAA TCGACATGGG CTGTGAGTAT TGCACCGCAA GCTATAGCTT CGACGCCATC GACATTGCCG CGCTTTTTAG TGATAACGCA GACACCAGTC AGACTAAGAC CCAATAG
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Protein sequence | MSRDILHRYL FDNADVRGQL VQLEDSFQAM LAAQDYPKAL QVLLGELMAA TSLLTATIKF SGDISVQLQG DGPVSLAVIN GNNELQLRGV ARWKGELAKD ASLPTLLGKG YMVITLTPDE GERYQGIVSL EHGTLAACLE EYFNQSEQLP TQIHLFATNA QAAGMLLQVL PSKQEQNDDF SHLSVLTQTI KPQELFDLGA EEVLHRLYHE EEVRLFEPMD VSFKCTCSRE RSAGALKTLS LVELETILAE EGKIDMGCEY CTASYSFDAI DIAALFSDNA DTSQTKTQ
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