| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0097 |
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| Symbol | |
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| ID | 4017161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 108476 |
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| End bp | 109558 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637954070 |
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| Product | putative SAM-dependent methyltransferase |
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| Protein accession | YP_561117 |
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| Protein GI | 91791466 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3129] Predicted SAM-dependent methyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00919321 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAC TTATCAGTAA GCAGGGCAAA CGGCCTGCAC TGTCTCAGAG CGGGCTTGCC
AAGCCCTCTA CATCGAAAAA GTCTTCCGCG TCCAAAAACG CAAATACCGA GACGGCTAAA
CTGCTCACTA AGGCCCTTCA CCCACGTAAC GTGCATAAGT ATGGCTATGA TTTTGCTGCC
TTATCTAAGA CATTGCCTGC GCTGACCCCT TTTGTGGGCC CCAATGCTTA CGGCAATATC
TCAATTGATT TTGCCAATCC AGATGCAGTT AAACAGCTTA ATGCCGCACT CTTGCTGCAC
CATTACAGCA TACGTGACTG GGATATACCT CATGGCTATT TGTGCCCACC CATTCCAGGG
CGAGTGGATT ATCTGCATTA TTTAGCCGAT TTATTGAGTG CCCCTCATAA GGGCAAGGCT
AATCGAAACA TTCGTGCGCT GGATATAGGC ACAGGTGCTA ATGGTATCTA TCCGCTTTTG
GGGATAGAAA GCTATTCATG GCAATTTGTC GCCAGTGATA TCGACAAGGT TTCATTGGAT
AATGTGGATG AAATCCTTGC AAAGAATCCG CAGCTAGCTG CCAAGCTTAG CCTCAGGCTG
CAGCTCAATC CCAAGGCGAT ATTTAACGGC GTGATTGAGA AGGACGAATA CTTCGATGTC
AGCTTGTGTA ATCCGCCTTT TCATCGTTCA TTAGCCGATG CCAACGCCGG CACTCAGCGT
AAACTTAGTA ATCTTGCTAA GAATAGAGGC CAGTCACAAC AGCAAGCAGT TCAAGCTAAG
GTTGCACTTA ACTTTGGTGG CCAAAAAGCA GAGCTTTGGT GCGAAGGCGG TGAAGCCGCA
TTTCTAGCTA ATATGATTTC TGAGAGCAAA GGCTTTGCGG CTCAGTGTCT ATGGTTTACC
TCATTAGTCT CAAAGTCAGA AAACTTGAAA CCTTGTTATG CGCAGTTAGC CAAACAAGGG
ACTAGCGAAG TGAAAACCAT AGAGATGCAT CAAGGCAATA AAATTACCCG TATTTTGGCA
TGGAGTTATC TCAGTCTTTC TCAGCGGCAA GCATGGGCCA AGCTGCGTGA TCAATCGCGT
TAA
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| Protein sequence | MSKLISKQGK RPALSQSGLA KPSTSKKSSA SKNANTETAK LLTKALHPRN VHKYGYDFAA
LSKTLPALTP FVGPNAYGNI SIDFANPDAV KQLNAALLLH HYSIRDWDIP HGYLCPPIPG
RVDYLHYLAD LLSAPHKGKA NRNIRALDIG TGANGIYPLL GIESYSWQFV ASDIDKVSLD
NVDEILAKNP QLAAKLSLRL QLNPKAIFNG VIEKDEYFDV SLCNPPFHRS LADANAGTQR
KLSNLAKNRG QSQQQAVQAK VALNFGGQKA ELWCEGGEAA FLANMISESK GFAAQCLWFT
SLVSKSENLK PCYAQLAKQG TSEVKTIEMH QGNKITRILA WSYLSLSQRQ AWAKLRDQSR
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