| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0095 |
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| Symbol | |
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| ID | 4017159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 107359 |
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| End bp | 107928 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637954068 |
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| Product | chorismate lyase |
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| Protein accession | YP_561115 |
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| Protein GI | 91791464 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG3161] 4-hydroxybenzoate synthetase (chorismate lyase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.179441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTGA CTAGTCTTAG CTTCCCTTAT GGTGAATCAA TTCAGTGGTT TTCACCAGAA
AGAGCCGATT CTATTCAAAA TGCTCAATTA AAAGACTGGT TATTGGCCAC TGGCAGTTTG
ACTCTCAAGC TAAAAAACCT CTGTAACGAC TTTGAAGTGA AAGTGCTAGG AGAGCAATTA
ACCTCACCTT TAGCAACAGA TACTATGATT GAAGAAACAG TATGGATGCG TGAAGTCTTG
CTTTGTCTAG ATGGTACACC TTGGGTATTT GCCCGCACCT TAGTGCCTCA GTCGCTACTC
GATTTTAAAT CCCAAGCCTT TACTCAATTA GGCAATAAGC CCTTGGGAGA GCTGTTATAC
ACTAGCCCTG AAATTATCCC AGGGAAAATA GAGCTGGCAA AGTTTGATAC CTGTAGCAGG
TTGGCAAAAT TAGCCACATC ATTAAAACAA GAGATTAGCG ACCCCCTTTG GGGTCGAAGA
CGCCATTTCA GTATTGATAC ACGTCATCTT ACCGTTAGTG AGATATTTCT TCCCGCCGCA
GTCGCACACA TGAAGCTGCA TAATAAATAA
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| Protein sequence | MKVTSLSFPY GESIQWFSPE RADSIQNAQL KDWLLATGSL TLKLKNLCND FEVKVLGEQL
TSPLATDTMI EETVWMREVL LCLDGTPWVF ARTLVPQSLL DFKSQAFTQL GNKPLGELLY
TSPEIIPGKI ELAKFDTCSR LAKLATSLKQ EISDPLWGRR RHFSIDTRHL TVSEIFLPAA
VAHMKLHNK
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