| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0094 |
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| Symbol | |
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| ID | 4017158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 104720 |
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| End bp | 107317 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954067 |
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| Product | peptidase M6, immune inhibitor A |
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| Protein accession | YP_561114 |
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| Protein GI | 91791463 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTGTG GTTTAACTTC CGCAACTTGT CTGAGTGCGC CAATTAATGG TAGCCCAGCT
GATGGGGCGA TTGTTAATAA AGAGCGGGTA CTCTACTGGT TGATTCACCA TGGTGATGTA
AGCCTGGATG ACAGTGACGA AGTCAAACAG GCGGCGGTAC AGGCATTTAT CGAACGCAGC
GGCCGCCATC AATTTAAGTT ACCGCGAGTA GAGGCTCAGG CCGAGCATAA TAGAGCCAAA
CGGGTTAATG CCGCTAAGTC TTCAGCTCGC CCAGAGCATG AAATACTTGC TCAAGTTGTC
GCTGACTCTG AAATCACTAA GACAGTTAAG GTCTTGGCTG TGCTGATAGA CTTCCCCGAC
TTACCTTATA ACGCTAATGG GTTAAAAGCT GGTGATACCG ATATGTTCTA TAGCAGCTAC
CCACCCAGTC ATTACAAGAA TTTGTTGTTC TCGACTACAG GTTTTAGCGG ACCTCAGAGC
CAAAATTTGC AATCGGGTTA TCAATATTTC CAAGCCGCAT CTGGGGGCAG TTTTTTCTTT
AATGGCGATG TCAAAGGCTG GTATCGCGCC AATAACAATG CGGCTTTCTA TGGCGGTAAT
GATGCTGCCA ATGATGACAG TGATAAAGCC GTGCCGGATT TGATTAAAGA AGCCGTGACT
CAGGCCGTAG CCTCTATGAC AAGTGCCGAG CTGAATTCCT ATGACATCGA AGACCCTTAT
GATCTCGATG GAGACCAAAA TTTTGATGAA AGTGATGGCA TTATCGATCA TGTGATGGTG
TTTCATTCCA GCATAGGTGA AGAAGCCGGT GGCGGTGTGC TTAAAGACGA CGCTATCTGG
TCACACAGGC ATTTTCTCGA CCAAGGGTCG GGTGGCTATA CCATTCCAGG TAAGTCTAAG
AAATTGTTTG GCTATACCAT ACAGCCAATC GATGCTGCGA CTGGGGTGTG TACCCATGAG
TTTGGCCATG ACTTAGGCTT GCCTGATGAG TATGACACCT CGAAAGATAC TCAAGGAGCA
CCAGTGGGCC TGTGGTCATT GATGGCCGGC GGCAGCTGGG TGGGAACACT CGCGGGCACT
AAACCATTAG CCGGTACTCA ACCCTCAGGT TTCAGTCCCT ATGCAAAATC TTATTTACAA
CAACGCTATA AAGGTAAGTG GGTCAATGAA CAAAGCATTT CTTTTGATAG CTTAAACGCA
ACTGGTGTAG ATTTACCCCT AAATCGAGCT GTGGATAGCG ATGATGTTAA TCAAATTTCT
ATCGCCTTGC CTCCTAGCCA GGTGGCGTTT AAGGCGCCTT TTAGTGGCCA ATATCAGTAT
TACTCGGGCC AAGGAAACTT GCTGAATAAT GCCATGTCAT TTGATCTTAC TTTGCCAATC
ACTAGCCCAT TGACCTTAAA CTTTAAGGCT CATTGGAACA TAGAACAAGA TTATGACTAT
ATGCAGCTTA AAGTGGATGG TGTCGCCATT GCAGGCAATC ACACTAAAGC CAGTAATTCT
AAGTACTCAG GTATAAATAA TTATATTTCA GGCGCGTCGG CTGCTATTGC GGGGGCCACA
GGCACAGATG CCTGGGTTGA ACTTAGCTAT GATCTTACTC CTTATGCAGG GCAAACCAAG
CGGATAAGCT TAGTGTATGT CACAGATGAG GCGAGCATAG AGTACGGCAT GGCAATAGAT
GATATTCGGT TATTGAATAA TACCAACCAG CTCTATATGG ATGGTGCTGA ATCATCCACA
TCAAGCAATG ACTTATTGTT AAATGGTTTT AGCCGTGTGA CTGATACTCG CCCCGGCAAA
GCACGCCGTT ATTTAATTCA ATTAAGAAAC CATAGCGGCA TAGATTCTGG GCTTAAGAAT
AGGGGCTATG AGCCAGGCGT TTTACTCTGG TTAGAGAATT TAGACCAAAG TGACAACAAT
GTGTTTAATC ATGAAGGTGA AGCCCTGATC GCCGTGATCG ATGCGGACCA AGAAATCATC
GGTGATGCTA CTACCACCGA CACAAACGTG CAAATTAGGG ATGCGGCATT CAGCCTTTAT
AACCAAAAAA CCTATTCTGG GGATGCGCAT TTGGCGGGCT CGTCACTTTT TGATGATAGC
CATGACTATA GTGCACCTTT AAAGCCCATG GCAGGCATCA AGCTTGACGA GTTAGGTTTT
ACCATGGAAG TCATCAACCA AACTGCGGAC AGCAGTAGTG CACTTATTCG CTTGAAAAAG
ACCGATGGCA CTATTCCAGA ACCAGCTGCA ATAGTCGCGA GCTTTAGTAC CACTATTACT
GACAACAAGG TTAACTTTGT AGCAAACGTG TCTGGCGGCA GTGGTGTTTA TAGCTATTTA
TGGGAATTTG GTACGGCTAA CGCCACCAGC GTATTAATGA ATCCTGAGTA TACCTATGCG
GTGACAGGGA CTTATACTGT GAATCTGACC GTCACTGATA GCTTGGGCAA GAGCCACAGC
AGTACACAAA CAGTTACTGT TACTAGACCT ACACCAATAG TGACACCAGT GGCTGATGCG
GGAGGCGGTG GCGGTAGTTT AACTTGGCTT TCTCTTGTGG GACTGGGATT ATTGGCTTGG
CGCAGACGAT TCGTTTAA
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| Protein sequence | MFCGLTSATC LSAPINGSPA DGAIVNKERV LYWLIHHGDV SLDDSDEVKQ AAVQAFIERS
GRHQFKLPRV EAQAEHNRAK RVNAAKSSAR PEHEILAQVV ADSEITKTVK VLAVLIDFPD
LPYNANGLKA GDTDMFYSSY PPSHYKNLLF STTGFSGPQS QNLQSGYQYF QAASGGSFFF
NGDVKGWYRA NNNAAFYGGN DAANDDSDKA VPDLIKEAVT QAVASMTSAE LNSYDIEDPY
DLDGDQNFDE SDGIIDHVMV FHSSIGEEAG GGVLKDDAIW SHRHFLDQGS GGYTIPGKSK
KLFGYTIQPI DAATGVCTHE FGHDLGLPDE YDTSKDTQGA PVGLWSLMAG GSWVGTLAGT
KPLAGTQPSG FSPYAKSYLQ QRYKGKWVNE QSISFDSLNA TGVDLPLNRA VDSDDVNQIS
IALPPSQVAF KAPFSGQYQY YSGQGNLLNN AMSFDLTLPI TSPLTLNFKA HWNIEQDYDY
MQLKVDGVAI AGNHTKASNS KYSGINNYIS GASAAIAGAT GTDAWVELSY DLTPYAGQTK
RISLVYVTDE ASIEYGMAID DIRLLNNTNQ LYMDGAESST SSNDLLLNGF SRVTDTRPGK
ARRYLIQLRN HSGIDSGLKN RGYEPGVLLW LENLDQSDNN VFNHEGEALI AVIDADQEII
GDATTTDTNV QIRDAAFSLY NQKTYSGDAH LAGSSLFDDS HDYSAPLKPM AGIKLDELGF
TMEVINQTAD SSSALIRLKK TDGTIPEPAA IVASFSTTIT DNKVNFVANV SGGSGVYSYL
WEFGTANATS VLMNPEYTYA VTGTYTVNLT VTDSLGKSHS STQTVTVTRP TPIVTPVADA
GGGGGSLTWL SLVGLGLLAW RRRFV
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