Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0084 |
Symbol | |
ID | 4017132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 93202 |
End bp | 94734 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637954057 |
Product | histidine ammonia-lyase |
Protein accession | YP_561104 |
Protein GI | 91791453 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGTCAT TTGAATTAGT ACCAGGCACC TTGAGCCTAG CTCAGCTGCG CCAGATCAGC CGTAACAAAG TGAACTTGCA CTTAGCCGAC TCGGCTATCG CCGAAATCAA TCAAAGTGCC GCCATAGTGC AGCAAGTGTT GAGTGAAGGC CGTACTGTTT ATGGTATCAA CACAGGTTTT GGCCTATTGG CGAACACTAA AATTGCGCCT GAAGACTTAC AGTTACTGCA GCGCTCGATT GTGTTGTCCC ACGCTGCAGG TTTTGGTCAA TACATGCAAG ATGCCTCAGT TCGCTTGATG ATGGTGCTTA AGATCAACTC CTTAAGCCGA GGCTTCTCTG GTATTCGTTT GGAAGTGATT AACTTTTTGA TTCAGTTGGT TAATGCCGGT GTTTATCCTT GTGTGCCTGA GAAAGGCTCA GTAGGCGCAT CGGGCGATTT AGCGCCACTG GCTCATATGT GTTTGCCACT ATTGGGCGAA GGCGAGATGA GCTACGAAGG GCAGATTATT TCTGCTAAAG AAGGCCTTGA AATCGCAGGC CTTGAGCCGT TAGAGCTTGC TGCCAAAGAA GGCTTAGCCC TGCTAAATGG CACCCAAGCT TCCACTGCAC TGGCGCTCGA AGGCTTATTT AATGCCGAAG ACTTGTTTGC GGCAAGTTCA GTGATAGGGT CTATGAGTGT GGAAGCGGCC ATGGGCAGTC GTAGCCCGTT CGATGCCCGT ATTCATGCGG CGCGTGGCCA GAAAGGTCAA ATCGATTCGG CTGCCGTGTT CCGTCATTTA TTAGGTGAAA CATCGGAAAT CAGCCTAAGT CATGTTAACT GCACTAAAGT GCAAGATCCG TATTCGCTGC GCTGTCAGCC ACAGGTATTG GGCGCATGTT TAACTCAAAT TCGCCATGCG GCAGATGTCT TAGGGGTCGA AGCCAATGGC GTGACAGATA ACCCGTTAGT ATTCCAAGAC ACGGGCGATA TTATTTCAGG CGGTAACTTC CACGCTGAAC CTGTGGCCAT GGCGGCGGAT AACTTAGCCA TAGCCATTGC CGAACTTGGC TCCATTGCCG AGCGTCGCAT TGCCTTGCTT ATCGATTCAA GCTTATCGCA CTTACCGCCA TTCTTAGTGA ATAACGGCGG GGTTAACTCG GGCTTTATGA TAGCCCAGGT AACGGCAGCA GCACTGGCTT CTGAAAATAA AACCTATGCC CATCCCGCCT CGGTAGACAG CTTACCGACA TCGGCCAATC AGGAAGATCA CGTCTCTATG GCGACCTTTG CCGCCCGCAG ATTGCGTGAT ATGAGTGAAA ACACCCGCGG CGTATTGGCA ATTGAATTGC TTGCTGCGGC GCAGGGGTTA GATTTTAGAG CGCCTCTAGC ACCCAGTGAG GCGGTGGCGA GTGCTAAAGC CGAGCTGCGT GAATTGGTCA CCTTTTACGA TAAGGACAGA TTTTTTGCGC CTGACATCGA AAGCGCTGCT GAGCTTTTGT ATAGCGCCAG CTTCAACGCT TATTTGCCTG CTGGATTAAT GCCAAGCTTC TAA
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Protein sequence | MMSFELVPGT LSLAQLRQIS RNKVNLHLAD SAIAEINQSA AIVQQVLSEG RTVYGINTGF GLLANTKIAP EDLQLLQRSI VLSHAAGFGQ YMQDASVRLM MVLKINSLSR GFSGIRLEVI NFLIQLVNAG VYPCVPEKGS VGASGDLAPL AHMCLPLLGE GEMSYEGQII SAKEGLEIAG LEPLELAAKE GLALLNGTQA STALALEGLF NAEDLFAASS VIGSMSVEAA MGSRSPFDAR IHAARGQKGQ IDSAAVFRHL LGETSEISLS HVNCTKVQDP YSLRCQPQVL GACLTQIRHA ADVLGVEANG VTDNPLVFQD TGDIISGGNF HAEPVAMAAD NLAIAIAELG SIAERRIALL IDSSLSHLPP FLVNNGGVNS GFMIAQVTAA ALASENKTYA HPASVDSLPT SANQEDHVSM ATFAARRLRD MSENTRGVLA IELLAAAQGL DFRAPLAPSE AVASAKAELR ELVTFYDKDR FFAPDIESAA ELLYSASFNA YLPAGLMPSF
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