| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0082 |
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| Symbol | |
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| ID | 4017130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 90669 |
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| End bp | 91376 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954055 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_561102 |
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| Protein GI | 91791451 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGCGC CGATTTTTGC TCAGATCAAG CAACATATCA TAGCCAATAT TGAAAATGGC
GCCTGGCAAG AAGATGATAA AGTCCCATCA GAGAACCAGC TCGCGAGCCA GTTTTCCTGT
AGCCGCATGA CAGCAAGACG CGCCGTGACT GAGTTGGTTG AGCAAGGTAT TTTGGAGCGC
AGCCAAGGAC TGGGTACTTT TGTTTCAGGA CTTAAGTCCC AGTCGTCACT GCTGACCATA
CGCAATATCG CCGATGAAAT TAAAGAACGG GGCCACGGCT ATAGTGTGCA GCAATTGGCT
TTGACTGAAA TCGCTGCTGC CGCCTCCATT GCTAATGCAT TAGATTTAGA GGTGGGTAGC
CCAGTGTTTT ATTCTGTGCT GGTGCATTGC GAGCAAGGCC TGCCGCTACA ACTTGAGCAG
CGGTTTGTTA ACCCTAAATT GGTGCCAGAC TATTTAGCCC AAGACTTCAG CCTGCAAACG
CCCCATGAGT ATTTATCTAA GGTGGCACCA CTCACCGAAG CCAAGCATAC GGTGGAGGCG
ATATCGGCCA ATAGCCAATT TCAGCAGCAA CTCAACATTG AAGCCAGCGA GCCTTGCCTG
CAGGTGCTGA GACGCACTTG GTCACGCCAA GGCGTGGTGA GTTTTTCTCG TTTGATCCAC
CCAGGTAGCC GTTTCCGTTT AGGCGGCCAC TTAAAGTTTT CTAAGTAA
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| Protein sequence | MTAPIFAQIK QHIIANIENG AWQEDDKVPS ENQLASQFSC SRMTARRAVT ELVEQGILER
SQGLGTFVSG LKSQSSLLTI RNIADEIKER GHGYSVQQLA LTEIAAAASI ANALDLEVGS
PVFYSVLVHC EQGLPLQLEQ RFVNPKLVPD YLAQDFSLQT PHEYLSKVAP LTEAKHTVEA
ISANSQFQQQ LNIEASEPCL QVLRRTWSRQ GVVSFSRLIH PGSRFRLGGH LKFSK
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