Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0073 |
Symbol | |
ID | 4017196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 81233 |
End bp | 81640 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637954046 |
Product | thioesterase superfamily protein |
Protein accession | YP_561093 |
Protein GI | 91791442 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAAGA CATTGCTGGA AATGGATATT TCGCCAAGAT TTAACGAAAC CGATGGCCTA GGTCACATCA ATAATACCGT GATCCCTGTG TGGTTTGAGG CAGCTCGTGA GCCTGTGTTT GCTATTTTTA ATCCAGAATT GGATTTAAAT AAGTGGAACT TGATTGTGGC AGGTTTTAAT GTGGCGTTTA CCTCGCCAAC TCAATACGGC CAAGCCGTCA GGATAAAAAC CTGGATAAGC CGCATAGGTA ACAGCAGTTT TGAGGTTGCC CAGCAGAGTT GGCAGGGCGA TAAGCTCACC GCCGAAGGTA AGACGACCTT AGTGCACTTC GATTACGCCA ATGATAAAAG CCAGCCAATC CCAACAGATA TTAAGCAACT GCTGGGGCTG TTAAGCGGCC AGGTTTAA
|
Protein sequence | MQKTLLEMDI SPRFNETDGL GHINNTVIPV WFEAAREPVF AIFNPELDLN KWNLIVAGFN VAFTSPTQYG QAVRIKTWIS RIGNSSFEVA QQSWQGDKLT AEGKTTLVHF DYANDKSQPI PTDIKQLLGL LSGQV
|
| |