Gene Sden_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0055 
Symbol 
ID4017178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp65404 
End bp66117 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content39% 
IMG OID637954028 
Producthypothetical protein 
Protein accessionYP_561075 
Protein GI91791424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.395459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA TTCAGAGTTT TCCTTGGGCG ATTAAACCTA TTCACAAGGT CGATAGTGAG 
CATCATGCTG GGAAACATCC GGAAAAAGTT AACCCAGCAC ATATAGAAGT AGCCTTGAAG 
CAGATGACTC CGGCGGAGCG AAAATCGCTT TTAGCGCCCT TTATTGAAGA TGAGCTGGCA 
TTGCATCGTG CTAATTTAGA AGCTCGCCTT ACCAAGGAAA TGAATAGTAA GCTAGATAAA 
CAATTACAAG TGGAAATTGA GCTTGCTGTC ATAAAAGTAA AGGAAGATGT TGAACACAAA 
GAGGCGCAGC GTAAGCAAAA AATTGAACAA TTAATTGCTC ATATTATGTC TCCTGAAATA 
ACGGGCGCAA CAAGTGACGC TGAGCAAGTC CTTGCTTTTG CGTTAGTGAT CGTTGAGAAA 
ATTTTAGCTC AAAAAATAGC ATCGAAACCT TGTTATGATT CATGGGTTGA CAGCATATTA 
GGCACAACTC GGGGGCACAA TTTACCCATC CTTAATATTA ACCAACAAGA CTATAATTTA 
TTATTAGAAT TTGACTTAAT TACTAAACTT AGTGAGAAAG TTTCTGAAAT TAAGATTAAA 
GATGTTGCTC ACTTCAGTTT TGAACTGGAG TCTATTTATG GTCAGAGCGG TCATGATTCA 
CTGGCAATAT TAACTCAGTT GCAAGCTTGG TTAAGTGAGC GCGCTTGTGA TTAG
 
Protein sequence
MEKIQSFPWA IKPIHKVDSE HHAGKHPEKV NPAHIEVALK QMTPAERKSL LAPFIEDELA 
LHRANLEARL TKEMNSKLDK QLQVEIELAV IKVKEDVEHK EAQRKQKIEQ LIAHIMSPEI 
TGATSDAEQV LAFALVIVEK ILAQKIASKP CYDSWVDSIL GTTRGHNLPI LNINQQDYNL 
LLEFDLITKL SEKVSEIKIK DVAHFSFELE SIYGQSGHDS LAILTQLQAW LSERACD