| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0043 |
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| Symbol | |
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| ID | 4017242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 55703 |
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| End bp | 56761 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637954016 |
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| Product | type III secretion exporter |
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| Protein accession | YP_561063 |
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| Protein GI | 91791412 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATG AGCATAAGTC AGAACAGGCT TCACAATATA AGCTTAATGA GGCTCGCAAG
CGTGGGCAGC TAGCAAAAAG TATGGAGCTT AATGCTTGGG TTTTAGTTTT GATCTCACTT
GCTTATTTCT ATTTGTTTTC TGAGTCATTA GCCAAAGAAC TAATGTCTGT TATCAGCCGC
TACTTGCAAA TTCTAGGCTC TGTAGATATT CGAAATAACT TCATGCTCAT AGCTTTCGAT
ATATTTTATC CTCTGGCAGT ATTACTCGTT CCCTTTTTCT CTATTTTAGT TGTTGCTAGC
ATAGTGATTA ACGTGCTGCT AAATGGGTTT GTGTTTAGTT TTGAACCATT ATCGCCAAAG
TTCGAAAAAT TAAATCCAGT CAAGGGCTTA AAGAAGATTT TTTCAAAGAA AAATTTATTT
GAATTTATAA AGCAGACGAT TAAATTGTTT TTAGTAGCAC TGTGTGGCTA TTTATTATTT
TATGGTGTTG TGGAAAGGCT GATTATTGCT AGTCAATCAC ATGTTTCATC CTTACTCGGC
ATGGCTTTGT CGCAAGAAAC ACTCAGATTG AGCTTTTATC TACTGCTAAC AATTTTCCCT
TTAATCGCAC TCGATGTGTT ATTCACTCGA TGGGACTTTA AGAAACAAAT GATGATGAGC
CATAGAGAAG TTAGGGAAGA GTATAAAAAG AAAGAGGGTG ATCCTCAGAT AAAATCTAAG
CGTAAAGAAG TACAAAAAGA ACTGGCAAAA AAATTAATTG CGTTAGGGAA GGTTAAAGAG
GCTGATGTCA TTATCAATAA CCCGACTCAT ATTTCAGTCG CGTTAAAATT TGATCCCCTG
ACTATGAACT CTCCAATTGT TGTGGCATCT GGAAGTGGTG TGTTAGGCAA GTTTATACGC
CGTATTGCGG TTAAACACAG TCTATTGCAG GTTACTAATA TTTCCCTTGC TCGTCGCTTG
TATAAACAGC TTGCTATTGG GCAGCCACTC CCAGCAGAGT ATTTTGATGA GCTGGCCCCT
ATTTACCGAA AAATTCTTGG CATGGATTCT AAAAAATGA
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| Protein sequence | MSDEHKSEQA SQYKLNEARK RGQLAKSMEL NAWVLVLISL AYFYLFSESL AKELMSVISR
YLQILGSVDI RNNFMLIAFD IFYPLAVLLV PFFSILVVAS IVINVLLNGF VFSFEPLSPK
FEKLNPVKGL KKIFSKKNLF EFIKQTIKLF LVALCGYLLF YGVVERLIIA SQSHVSSLLG
MALSQETLRL SFYLLLTIFP LIALDVLFTR WDFKKQMMMS HREVREEYKK KEGDPQIKSK
RKEVQKELAK KLIALGKVKE ADVIINNPTH ISVALKFDPL TMNSPIVVAS GSGVLGKFIR
RIAVKHSLLQ VTNISLARRL YKQLAIGQPL PAEYFDELAP IYRKILGMDS KK
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