Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0040 |
Symbol | |
ID | 4017239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 53406 |
End bp | 54374 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637954013 |
Product | hypothetical protein |
Protein accession | YP_561060 |
Protein GI | 91791409 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.984487 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACA TGAAAAGAAG TATCTTACCC TTTGCACTGC TGGCAATGAT TGCCTGTAGC TTTAGTGCTG TTTCCGCAGT GAATAACCAA CCAAAGTATA ATACCACTAT CGTTGATAGT GATTATATCT TAGAAATGTC GAAATATCAG GACTACCGTG GGTCATTGAA AGTTTCTGAT GATCACTTGA ATAGCAATGT TTACAGAACA CATCAAAAGC TACTTAAGTC TTTTACTGAT TTACGTGCCC TTAAGAGCCA GCTTGAGCCA GAAATAAAAA GGTTATTTGA TGGAACCGGC CTGCACTATC GCTGGTTTAA TTTCGATGTA ACAGGACCTA TAGAAGTTAA ACTCAGTGGC ACTGCAAGTG GTGCGATAAA ATTAGAACTG AGTAAATTTA GCCTACGTGG ACAAGTTAAA GCCGAAAAAA GCTGGTATTT GAATGTTTAC GGCACGCTGA CGATGAATAA TGCCTATGCT TCTGGTGAGA TAGATTTGGC TACGGGTAAA GTGAAAAATT TGACATTGCA CAGTAAGTTC AATTTTGATT TTGATTCAAC AATTAAATAT TTAATGCCAA CTTCTAATTT TTTTATTACT GAATTAGGAA ACTATTTGAT AGATATTATT TCAGAAAAAA TGATTGCTAG CTATGATGGC TACCAAACCA TGTATAGTTT AGATAAGGTT GTTCCAGCAT ATAAATATGT ATATCAAGGT ATTGATATTG GCTGGGAATT AAGGCAACAG CTGCTTGGTA TGATTAATGG TGAGTTTATC AAGATCACTA TGAAAGAGCT TGCCTTGGCG CCGAGCACAC GACCTTATGC TTGCTACGAG CCTGGTAATG TGTCATGGAA CTCAAATTTT GCAGAGATCA ACATTTCCAA TAAAGCATTC TTTAAATTAA GCAGAACAGA TGTTCAGAAA TGTGAATGGA ATGGTAGTGG AGGACATACT GATTATTAG
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Protein sequence | MNNMKRSILP FALLAMIACS FSAVSAVNNQ PKYNTTIVDS DYILEMSKYQ DYRGSLKVSD DHLNSNVYRT HQKLLKSFTD LRALKSQLEP EIKRLFDGTG LHYRWFNFDV TGPIEVKLSG TASGAIKLEL SKFSLRGQVK AEKSWYLNVY GTLTMNNAYA SGEIDLATGK VKNLTLHSKF NFDFDSTIKY LMPTSNFFIT ELGNYLIDII SEKMIASYDG YQTMYSLDKV VPAYKYVYQG IDIGWELRQQ LLGMINGEFI KITMKELALA PSTRPYACYE PGNVSWNSNF AEINISNKAF FKLSRTDVQK CEWNGSGGHT DY
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