Gene Sden_0039 details

Gene Information

• Locus tag: Sden_0039
• ID: 4017238
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 51134
• End bp: 53167
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637954012
• Product: hypothetical protein
• Protein accession: YP_561059
• Protein GI: 91791408

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATACTCT TTTTTCTTTG GCGAGATAAA GCCTACCACT TTCAGCAGTT GGCTTCTTCT 
ACGCCTCAAT TAAGAGTGTC GCAGTTATTA TCTGAATTCG GGCTTAAGGT GATTTTACCT 
TACACAAGGA GAGTTATAGT GAATATAAAT GTAAAAATAT TTGTTCTGAT TGTCATGTTA 
TGTATAAGCA TGTACACACC TTCTACCACG GCACAAGCTG GTAAATATAA TGCCAATGCC 
GTTGATGATC TGTATAATTT TTATGCAGAA TCAAGAGGGG TAAACTGGAA AAATACAGAT 
AAGTATAAAG GCTCTTGGCA TGCAAATGGG ATTAAAGAGC ATTATCAAAA CTCTCTCTAT 
AAATATTCTG GCCCCACATC AACCTATACC GCTAAGCATG CCCCTTTGGC CGTTGAAAAA 
GGTAAATTTA CTTATTTCAT CATTAATGGC CAACAAGAGG AATATCCTTA TACGCCTAGG 
CAAGCGGCAG CGAGTTATAA TACTAGTCAT AAAATCAGCC CAATATCTAT GATGGTTGGG 
AAATATGATA ATGTTACTGG CACACTTTAT CCACCGACAA CAGTACATGT AAAAAGTACG 
ACTGATTCAC ATGATAACGC GTCAATAAAT GTTGATAGTG ACGGATTTTT GTATGTTTTT 
GTGTCTGGCC GTAGTGGTGT ACGTGGCGGG TTAATATATA AAAGTAATTC TGCTAATAGC 
ATAGAGTCTT TTAAGCTGGT ATATAGCGGG AAGCACAGTA TTGAAACGTT AGATTTAGAT 
TGTGATCCAA ATTATGCACC TAACGGATGG GAGTTATGTA GAAATGAATA CAGAGGCTTT 
ACCTATCCAC AGGCGTGGTG GACAGGTAAT AAATTTGTTC TATTACATAC TATATATTTA 
CCTTTGACCT ACGACGATCC CGCAGCTAAC CCTAGTTATA TGCGAGCAAC TTATATTTCA 
ACAGTTACTC CAACTTCAGG CGGTGTTACA GTATCAAGCC CGAGTAAATT AGTTGCTGTT 
AAAGGCGATT ATACTAAAGG TCATTATTCT ATTAGCAAAG AGAAAAATGG CACGATAGGA 
CTAGCATTTA ATCTTCATGT CGATGATGAA ACAACTTGGA AAGGCAAAGC TGTAGCACCT 
CATGACAGTA GAACTAATCT CTATTTTATG TATTCAAAAA ATGGTAATGA TTGGTTTAAT 
ATAAAGGGAG AAGAAGTTGC TTCTGGAATG CTAGATAGAG GTACTTCTAA TAGAGGTATT 
ACCAAGCCAT CACAGCTGTC TTCTATTGCT GTCAAAGAAT ATCACAATCC TGTTACAGGT 
GAGACCAATG AAACAACGTG GTGTGATGAT CGACATGCTG TTTTGGGAAA AAGCAGCCCT 
AGTAAATATG TTTGCAGAAG AGTCTATTTG AAAGACATAG ATTTTACAAT TGATGCGCAG 
GGTAAGCCAA ATCGGGTAGA AATATTATAT GTCGCTAATC GTTCGGTTGA ATATAGTACG 
ATTAATAATG TCTCTAAGGA GTTTGGCCCT TATCCCAGTC CTGAAATAGC TGAAAATGAT 
ATCTACTTAG CCAGAGCTTT TTATAATAAA GATAATGCTC TTGGCTGGCA AACTGAAAGA 
GTTAAAGATG CAAGCGGCAA AGATGTCGTC GATCATAATT ATTCATCCGG TACACTAACC 
ATTGTGGATG GCGCTAGCTA TATTATTACT CCTGCATCAC AGGAGCGGGA TGGTTATGCA 
GGTCAACGCC AAGTTAAAGT GCTTAAAAAT ACTACTGGAG CTAAAGGGAG TTGGAATGAA 
GTTTATTCGA AATACTCAGT TCCACTTACA GCTGGTAAAA CAGCAAATTA TGTTCGCAGC 
GTACACAATT CTACATCTAA ATTTAGAGTG TTATGGTCTG AAGGGTTGGC AGATGTTGAT 
GCTGATGGTG GGGAAGAAGT TAAAGTATAT TTAGGCGATT TAACCAATAA AAAACTGTTA 
CTTCCCAATA CCGGCACATT GCCTATAAAT GGTAAGTATG TGCCGTTTAA TTAG 

 

Protein sequence

MILFFLWRDK AYHFQQLASS TPQLRVSQLL SEFGLKVILP YTRRVIVNIN VKIFVLIVML 
CISMYTPSTT AQAGKYNANA VDDLYNFYAE SRGVNWKNTD KYKGSWHANG IKEHYQNSLY 
KYSGPTSTYT AKHAPLAVEK GKFTYFIING QQEEYPYTPR QAAASYNTSH KISPISMMVG 
KYDNVTGTLY PPTTVHVKST TDSHDNASIN VDSDGFLYVF VSGRSGVRGG LIYKSNSANS 
IESFKLVYSG KHSIETLDLD CDPNYAPNGW ELCRNEYRGF TYPQAWWTGN KFVLLHTIYL 
PLTYDDPAAN PSYMRATYIS TVTPTSGGVT VSSPSKLVAV KGDYTKGHYS ISKEKNGTIG 
LAFNLHVDDE TTWKGKAVAP HDSRTNLYFM YSKNGNDWFN IKGEEVASGM LDRGTSNRGI 
TKPSQLSSIA VKEYHNPVTG ETNETTWCDD RHAVLGKSSP SKYVCRRVYL KDIDFTIDAQ 
GKPNRVEILY VANRSVEYST INNVSKEFGP YPSPEIAEND IYLARAFYNK DNALGWQTER 
VKDASGKDVV DHNYSSGTLT IVDGASYIIT PASQERDGYA GQRQVKVLKN TTGAKGSWNE 
VYSKYSVPLT AGKTANYVRS VHNSTSKFRV LWSEGLADVD ADGGEEVKVY LGDLTNKKLL 
LPNTGTLPIN GKYVPFN