| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0038 |
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| Symbol | |
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| ID | 4017237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 50191 |
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| End bp | 51132 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637954011 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_561058 |
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| Protein GI | 91791407 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATC AGCAGTTGAC TGAGGGAAGA AGATATCAGA TTTCAGTCCT TTTAGACCAG
GGTATTTCGA TAGCTTTGAT TGCAAAAGCT ATCAATTGTC ATCGTGCGAC TGTCTATCGA
GAACTAAAAC GTTGTCATGC CCTGCAGGGT TATTGCCCTG ACAGCGCTCA AGCCAGTGCG
TGTAAGATGC GGCGTCATTC AGCCAAATAT ACCATCCCCG ATACAAGAAT AAACTTCGTC
CGCTTCCTAC TGCAACATGA TTGGAGCCCA GAGCAGATTT CACGGGTGTT ATCGGGCATG
AACCAAGCTG TTAGTCATGA ATGGATTTAC CGCTTTGTGG CAAGGAATAA ACGTCAAGGC
GGCAAGCTAT ATCGCCATCT ACGGCAAGGT CATAAGCGCT ATCGCAGAGG TAAAAAAGAG
AAAGCGCCAG CGATTAAAAA TGGTACCTCT ATCGACTCTA GACCTGCCAT TGTTGATACT
CGCGAACGTT TCGGTGATTG GGAAATCGAT ACCGTATTAG GCAAGCATGG GACAGGTTCA
ATAGTGACAA TTTTAGAGCG AAAGACCCGT TTTTATTTAA TAAAGAAAGT GGCCTCAAAA
TCTGCTGAAG ATGTGACTAA AGCGACTATC GAATTATTGA TGCCCTATAA GCAATATGTG
CACACTATAA CTGCCGATAA TGGTCGTGAA TTCGCTCATC ATGAAGTCAT AGCCAACGCG
TTAGACACAA CATTTTACTT TGCTCATCCG TATAGTTCTT GGGAACGTGG CGCCAATGAA
AATGCCAACG GTTTATTAAG GCAGTATGTA AAAAAAGGGA CTGACTTAAG GACAGTAAGC
GACGCCATCA TCTTATTTGC CCAGAACAGG ATTAATTACA GACCTAAGAA ATGTTTGAAG
TTTAAGCAGC CAGCTGTTGT GTTTAAACAA TTAGCCGCTT AA
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| Protein sequence | MSYQQLTEGR RYQISVLLDQ GISIALIAKA INCHRATVYR ELKRCHALQG YCPDSAQASA
CKMRRHSAKY TIPDTRINFV RFLLQHDWSP EQISRVLSGM NQAVSHEWIY RFVARNKRQG
GKLYRHLRQG HKRYRRGKKE KAPAIKNGTS IDSRPAIVDT RERFGDWEID TVLGKHGTGS
IVTILERKTR FYLIKKVASK SAEDVTKATI ELLMPYKQYV HTITADNGRE FAHHEVIANA
LDTTFYFAHP YSSWERGANE NANGLLRQYV KKGTDLRTVS DAIILFAQNR INYRPKKCLK
FKQPAVVFKQ LAA
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