Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0034 |
Symbol | aroE |
ID | 4017900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 40277 |
End bp | 41098 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954004 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_561054 |
Protein GI | 91791403 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000000384966 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AGTATGCCGT CTTTGGCAAC CCCATAGCCC AAAGTAAATC GCCCATGATC CACACTGAGT TTGCCAAACA GACTCAGCAA AACATGAGCT ATTCGGCAGT GCTGGCTCCT GTGGAAGGGT TTGCAGCCAG TATTAAGTCA TTTTTTGCCT CTGGTGGTCG TGGGGCCAAC GTCACAGCAC CATTTAAAGA GCAAGCTTTT AGCTTGTGTG ATGAGCTCAG TGAATTAGCG CAACTCGCGG GGGCGGTGAA CACCTTAGTG CGTTTAGAAG ATGGTAGGCT CAGGGGGGAC AATACCGATG GTCTAGGTTT AGTCGCCGAT ATTGAGCGGC GATTGACTTC GCTCAAGGAT AAACGGGTCC TGCTAGTGGG AGCGGGCGGC GCTGCAAGAG GGTGTATATT ACCTCTGCTA CAGGCGGGTG TTGCTCAGCT CGATATCACT AACCGCACTC ATGACAAAGC TCTGCAGTTA GCTCAGTTAT TTAGTCGCTA TGGCAATATC AAGGCGCTAA CGCTTACAGA GCTTGCTTCT GGCTATGACG TCATTATTAA TTCAAGCTCA GCAGGCTTAA CAGGCCAACT TATTAGCTTG CCGAGCACGA TTATTGATGG CACTACTTAT TGCTATGATA TGAGCTATGG CAGTGATACG ACCCTGTTTA ATCAATGGGC CCTGTCAGCG GGTGCTTGCC ATTGCTGTGA TGGTTTGGGG ATGTTAGTCG GTCAGGCGGC GCAAAGTTTT TATTTATGGC GAAATGTCCA TCCAGATGCC ACTACTGTGA TGCAACAGCT GCGTGATGCA CTGGGTCGTT AA
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Protein sequence | MTDKYAVFGN PIAQSKSPMI HTEFAKQTQQ NMSYSAVLAP VEGFAASIKS FFASGGRGAN VTAPFKEQAF SLCDELSELA QLAGAVNTLV RLEDGRLRGD NTDGLGLVAD IERRLTSLKD KRVLLVGAGG AARGCILPLL QAGVAQLDIT NRTHDKALQL AQLFSRYGNI KALTLTELAS GYDVIINSSS AGLTGQLISL PSTIIDGTTY CYDMSYGSDT TLFNQWALSA GACHCCDGLG MLVGQAAQSF YLWRNVHPDA TTVMQQLRDA LGR
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