| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0033 |
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| Symbol | |
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| ID | 4017899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 38937 |
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| End bp | 40229 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637954003 |
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| Product | amidohydrolase |
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| Protein accession | YP_561053 |
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| Protein GI | 91791402 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000020802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAA ATAAAAGATT AGCATTGAGT ATCGCCTGCG CCTTGTTGTT CACAGGTTCA
CTGTCGGCGC AAACCTTAGC CATCAAAAAC GCCACAGTAC ATACCGCGAC AGCCCAAGGT
GTGCTAACTG GGGCCACGGT ATTAATTGAA GATAATAAAA TTATCAAAAT TAACCCAAAA
GAGTATCAGG CAGATGCAGA GTTTGATGCA GAAGGAAAGA TATTAACTCC AGGTTTTATT
GGCTCAATGA ATCCGCTAGG ACTCGTCGAA ATAGGCATGG TGGGTTCGGC CAATGACAGT
GCAGACAAGA AAGCCAGCAT TAATTTCGAT CCCAGCCTAG GTTTTAACCC TAAGGCCAGC
ACTATAGCTT TTGCTAGAAA AGGCGGCGTG ACCACTAACC TGGTGGTCAG CAGCGCCAGT
GAAAGTATAT TTGCCGGACA AGGGTTTGTG GTCTCCTTAT CGGGAGAGTG GGATAGCATG
ATTTCTGCCC AAGGTCCGTT AGTGGTTAAC TTGGGGGCTA AAGATGAAGG CTCACGAGCC
ATGTCACTGC AGGAGCTTGC TGAACAATTA GACGATGCTC AAAAGGCACA AATTAAGGCG
AATAACAAAG CCAGTGCTAA ACATAAAAAA GACGATAGTG ACGAAGATGA GCCAAGCCGA
GATCAGCTGG TATTAATCGA GTTACTAAAA GGCAACAAAA CTTTGATTGC AGAAGCCCAT
CGCGGCAGTG ATATTTTAGC GTTACTTAAG TTAAAGCAAC AATATCAGTT GAAACTCGTG
ATAAGTGGCG CCGCCGACGC AGTGTTAGTG GCGCAGCAGC TGGTGGATGC CCAAGTGCCA
GTCATTATCA ATGCCATGGA CAATCTGCCA GACAGCTTCG ATTCGCTTAA TAATGCCATG
AATAATGCGG CTAAGCTTAA TCAGGCGGGG GTTAAGATAA TCTTAGCAAT ACCGGGGGAT
AGTCATGGAC TTTATGGTTT GCGTTTCACA GCAGGCAATG CCGTGGCTAA TGGCTTACCC
GCTGAAGCGG CCTTAAAAGC ACTGACGGCT AATGTCGCCG ATGTGTTTCA GCTAAATTCT
GGCCGAATTG AGGTGGGTAA AGATGCTAAT TTAGTGCTTT GGAGTGGCGA TCCATTCGAA
TACAGTACTC GTGTGGAAAA ATTATGGATA GACGGCAAGG AGCAGCAACT TGAAAGCCGT
CAGGATAAAT TGCGTGACCG CTACATGAGT CAGTCAATTC TGCCAAAAGC GTATAATCAA
GGCGGAGCGG CTAGGGTAAG TCGTGAGCCA TAG
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| Protein sequence | MKTNKRLALS IACALLFTGS LSAQTLAIKN ATVHTATAQG VLTGATVLIE DNKIIKINPK
EYQADAEFDA EGKILTPGFI GSMNPLGLVE IGMVGSANDS ADKKASINFD PSLGFNPKAS
TIAFARKGGV TTNLVVSSAS ESIFAGQGFV VSLSGEWDSM ISAQGPLVVN LGAKDEGSRA
MSLQELAEQL DDAQKAQIKA NNKASAKHKK DDSDEDEPSR DQLVLIELLK GNKTLIAEAH
RGSDILALLK LKQQYQLKLV ISGAADAVLV AQQLVDAQVP VIINAMDNLP DSFDSLNNAM
NNAAKLNQAG VKIILAIPGD SHGLYGLRFT AGNAVANGLP AEAALKALTA NVADVFQLNS
GRIEVGKDAN LVLWSGDPFE YSTRVEKLWI DGKEQQLESR QDKLRDRYMS QSILPKAYNQ
GGAARVSREP
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