Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0030 |
Symbol | |
ID | 4017896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 35954 |
End bp | 36871 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637954000 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_561050 |
Protein GI | 91791399 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000103554 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGGCC CCGATACCCA TGCGGTCAAA CAGTTTTTGT TGGCACTGCA AACGAATATT TGCGCTGAAT TAGAACAACT CGATGGTGAA GCGAGCTTTA AGGCTGAATC ATGGCAGCGC GCCGAAGGTG GCGGTGGTAC CAGCCGAGTG TTAACTCAGG GTAAGTTGTT TGAGCAAGCT GGGGTAAATT TCTCCCATGT GAAAGGGGCG GCTATGCCAG CTTCTGCCAC GGCCCACAGA CCTGAACTGG CTGGACGCAG CTTTGAAGCC ATGGGAGTGT CGTTAGTTAT TCACCCTAAT AACCCATACA TACCAACGAC TCATGCCAAT GTGCGCTTCT TTATTGCCAG TAAAGAAGGT GCCGATCCTG TGTGGTGGTT TGGCGGTGGT TTCGATTTAA CGCCTTATTA TCCCTTCAAA GAGGATGTAC TCAGTTGGCA TCAGACGGCG GCAGACTTGT GTGCGCCTTT TGGTGAAGAG GTGTATCCCA AGTATAAGAA GTGGTGTGAT GACTATTTCT TCTTGCCCCA TAGAAACGAA ACGCGTGGAG TGGGTGGATT ATTTTTCGAT GATCTCAATC AGGCGGGTTT TGAGCAGAGT TTTGCCTTTA TGCGCGCCGT GGGTGAAGGC TTTATTCAAG CTTATGCGCC CATCGTTGAA CGTCGTAAGG CGCTTAGCTT TGGTGAGCAT GAGCGCCAGT TCCAATTATA CCGCCGTGGC CGCTATGTGG AGTTCAATCT TGTCTATGAC AGAGGTACAC TGTTTGGTTT GCAAACCGGC GGTCGAACCG AGTCAATCTT GATGTCCATG CCGCCATTAG TGCGTTGGGA GTATGGTTTT ACTCCGGCAG CCGGTTCAGT GGAAGCTGAA TTGTATGAGG TATATTTAAA ACCTCAAGAT TGGTTGCAGC AGGCTTAA
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Protein sequence | MTGPDTHAVK QFLLALQTNI CAELEQLDGE ASFKAESWQR AEGGGGTSRV LTQGKLFEQA GVNFSHVKGA AMPASATAHR PELAGRSFEA MGVSLVIHPN NPYIPTTHAN VRFFIASKEG ADPVWWFGGG FDLTPYYPFK EDVLSWHQTA ADLCAPFGEE VYPKYKKWCD DYFFLPHRNE TRGVGGLFFD DLNQAGFEQS FAFMRAVGEG FIQAYAPIVE RRKALSFGEH ERQFQLYRRG RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWEYGF TPAAGSVEAE LYEVYLKPQD WLQQA
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