| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0022 |
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| Symbol | |
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| ID | 4017888 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 29050 |
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| End bp | 30336 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637953992 |
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| Product | sun protein |
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| Protein accession | YP_561042 |
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| Protein GI | 91791391 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATT TGCGTGCCTT AGCGGCCAAA GCTATTTTTG ATGTGCTCGA GAAAGGTCTT
TCACTCTCGG TAGCCTTACC TTTGCAGCAG CAACATGTGC AAAATGGCAA AGACAAAGCA
CTTTTAGCCG AGCTTTGCTA TGGCGTGATG CGCCAACTAC CTCAGCTAGA TAAATGCGTG
AGCGACTGTT TAGCTAAACC TTTCAAGGGT AAGCAGCGTA TTCTGCATCA ATTACTGCTC
GTCGGGTGTT ATCAGCTGTA TTTTACCCGT ATCCCTAGCC ATGCTGCGGT ATCTGAGACT
GCTGAAGCCT GCAGGCAACT GAAATTCGAT GGTCTAGTCA AGGTGGTCAA CGGCGTACTT
AGAAACATCC AGCGCCAAGA ACCTGAACTC AATACCGACT CCGACACCTT AAAGTACAAT
ACCCCTGCAT GGTTAATTAA GCGCTTGCAG CAAGCTTATC CACAGGATTG GCAGCAAGTG
ATAGAACAAA GCCATGAGCG CCCTCCTATG TGGCTGCGCA ACAATCGCCT AGTGCAAACT
CGTGATGCCT ACCTCGCTAG CTTAACCAAT GAAAATATTG AAGCCAGTGC AGGCTTAAGC
CCAGATGCTA TCTTGCTTGA GAGCCCCACA GATGTACTGC AACTGCCAGG TTTTATGTCA
GGTAGCGCGT CGGTTCAAGA TGGTGCCGCA CAATGGGCCG CGACGTTATT AGCCCCACAA
GCCAATGAAG TTGTGCTTGA TGCCTGCGCC GCCCCGGGTG GAAAGACCTG TCATCTGTTA
GAAATCGCCC CAAACATTAG CCTGACGGCG GTGGATTTTG ATCTAAAACG TCTTGAGCGA
GTACAGCAAA ACCTAGACAG ATTAAAATTA ACAGCACAGG TTATTCATGG TGATGCCGCC
AATATTGATA GCTGGTGGCA AGGTGACAAA TTCGATCGTA TTTTGCTCGA TGCCCCCTGC
TCTGCAACTG GGGTGATTCG CCGTCATCCA GATATCAAAT GGTTACGCAA GAATAGTGAT
ATCGATGAAC TTGCCACGCT GCAAATGCAA ATTTTAGATC ACTGTTGGCA ATGGTTAAAA
CCGGGTGGTA CCTTGCTCTA CGCTACCTGC TCAATTCTGC CAGAAGAAAA CAGCCAGCAA
ATCAATGCAT TTTTAACTCG CACTGCTGAC GCTTCATTGG TTGCCATCAG TGAACAGAAA
AACCCTGCTG ATATCGGCTG GCAAATTTTG CCAGGACAAG ACAATATGGA CGGCTTCTAC
TACGCTCGTC TCGTTAAAGC ACGCTAA
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| Protein sequence | MMNLRALAAK AIFDVLEKGL SLSVALPLQQ QHVQNGKDKA LLAELCYGVM RQLPQLDKCV
SDCLAKPFKG KQRILHQLLL VGCYQLYFTR IPSHAAVSET AEACRQLKFD GLVKVVNGVL
RNIQRQEPEL NTDSDTLKYN TPAWLIKRLQ QAYPQDWQQV IEQSHERPPM WLRNNRLVQT
RDAYLASLTN ENIEASAGLS PDAILLESPT DVLQLPGFMS GSASVQDGAA QWAATLLAPQ
ANEVVLDACA APGGKTCHLL EIAPNISLTA VDFDLKRLER VQQNLDRLKL TAQVIHGDAA
NIDSWWQGDK FDRILLDAPC SATGVIRRHP DIKWLRKNSD IDELATLQMQ ILDHCWQWLK
PGGTLLYATC SILPEENSQQ INAFLTRTAD ASLVAISEQK NPADIGWQIL PGQDNMDGFY
YARLVKAR
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