Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0018 |
Symbol | |
ID | 4017810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 25312 |
End bp | 26769 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637953988 |
Product | K+ transporter Trk |
Protein accession | YP_561038 |
Protein GI | 91791387 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATATA AAACAATAAT AAGGATCACA GGTTTGTTGA TGGGGTTATT CTCTATCACT ATGCTTCCGC CTGCATTAAT TGCCGTATTT TACGGTGATG GCGGCGGTAC AGCATTTATT AAGGCGTTTG TTGTCAGTAT CTTGCTGGGA TTAATGCTTT GGTACCCGAA CCGTCATCAA AAAGCCGAAT TAAGAACCCG CGAAGGCTTT CTCATTGTGG TGCTGTTTTG GACTGTACTG GGCTCCATTG GCGCCTTGCC GTTTATTTTC TCAAAGGTGC CAGATTTAAG CTGGACTGAC AGCTTCTTTG AGTCTTTCTC TGCGCTGACG ACCACTGGGG CTACCGTCAT TGTTGGCCTA GATACCTTGC CCAAGGCTGT GCTGTTTTAT CGCCACTTAC TGCAATGGAT GGGCGGCATG GGTATCATTG TGCTCGCTGT GGCTATCCTG CCACTGCTGG GTATTGGTGG TATGCAGTTG TATAAGGCCG AGGTGCCAGG GCCGGTGAAA GACAGTAAGA TGACCCCGCG CATTGCCGAG ACAGCCAAGG CCTTATGGTA TATTTATTTA TTGCTGACCG TGTCTTGTGC GACGGCATTC TATTTTGCGG GCATGAGTGT GTTTGACGCC ATTTGTCATT CATTTTCCAC CATAGCCATA GGTGGGTTTT CAACTCATGA CGCGAGTATT GGTTACTTTA ATAGCCCTAT GATTAACACT ATTTGCGCTG TGTTTTTGCT TATTGCTGCG GTGAATTTTA GTCTGCACTT TGCTGCATTC TCCTTGAGGG GCATTAATTT CAAGGTCTAC TTTAAAGATA CCGAATTTAA AGCTTTAATT GCTATCCAGC TGATATTAAC CGCTATCTGC TTTGTGACTC TCTATTCCAC TGGGGTTTAC GACTCGCCTG AACAAACCTT AGATTATGCC TTCTTTCAGG TGGTTTCTAT TTCTACCACC GCAGGATTTG GTACCGAGAG TTTCCATACT TGGCCACTGT TTTTGCCCAT ATTACTGATA TTTTCAAGTT TCATTGGTGG TTGCGCCGGC TCTACGGGGG GCGGCATGAA GGTTATTCGA CTTATCTTGT TGCTACTGCA GGGCTCACGT GAGTTAAAAC GCTTGGTGCA CCCTAAGGCC ATGTATTCCA TTAGGATCGC AGGTTCGGCC TTGCCGGACA GAATCATTGA TGCGGTGTGG GGCTTTTTCT CGGCTTACGC CTTAGTGTTT GTTGTCTGCA TGTTGGCCTT GATGATGATG GAAATGGATG CAATAACCGC CTTTAGTGCT ACTGCGGCCA GCTTAAATAA CTTAGGCCCA GGGCTAGGTG ATGTGGCCAA TAATTATGCC AGTATCAGTG ATGGCGCCAA ATGGGTGTTA GTCACGGCTA TGTTATTTGG CCGCTTGGAA GTGTTCACCT TATTAGTGCT ATTCACCCCG ACATTCTGGA AAAACTAA
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Protein sequence | MQYKTIIRIT GLLMGLFSIT MLPPALIAVF YGDGGGTAFI KAFVVSILLG LMLWYPNRHQ KAELRTREGF LIVVLFWTVL GSIGALPFIF SKVPDLSWTD SFFESFSALT TTGATVIVGL DTLPKAVLFY RHLLQWMGGM GIIVLAVAIL PLLGIGGMQL YKAEVPGPVK DSKMTPRIAE TAKALWYIYL LLTVSCATAF YFAGMSVFDA ICHSFSTIAI GGFSTHDASI GYFNSPMINT ICAVFLLIAA VNFSLHFAAF SLRGINFKVY FKDTEFKALI AIQLILTAIC FVTLYSTGVY DSPEQTLDYA FFQVVSISTT AGFGTESFHT WPLFLPILLI FSSFIGGCAG STGGGMKVIR LILLLLQGSR ELKRLVHPKA MYSIRIAGSA LPDRIIDAVW GFFSAYALVF VVCMLALMMM EMDAITAFSA TAASLNNLGP GLGDVANNYA SISDGAKWVL VTAMLFGRLE VFTLLVLFTP TFWKN
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