| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0002 |
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| Symbol | |
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| ID | 4017794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1418 |
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| End bp | 2518 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637953972 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_561022 |
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| Protein GI | 91791371 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000000200886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTT CTATCGATAG GGACGCCCTA TTAAAACCAC TTCAATTGGT TACAGGTGCT
GTCGAACGTC GTCATAATTT GCCTATTTTA GCTAACTTGC TGGTTAAGGT TAGCCAAGAC
GTAATTAGTC TTACCGGGAC AGATTTAGAA GTTGAGCTCG TGGGTCAAGC CGCTATTCAT
GGGGACATAG TCCCTGGTAA CACCACAGTG CCAGCTAAAA AGTTACTCGA TATCGTCAAA
TCATTACCAG AGCAAAGTGA ACTGCATGTG GAACAGCAAG ATAACCGTTG GTTATTGCGC
TCGGGTCGCA GCCGTTTTAC CTTGGCGACG CTGCCAGCAT CAGATTATCC CAATGTGGAA
GCCTTTCAAG CAGAAATTGA ATTCACCATT AAGCAAGGCG TGCTTAAGTC GATCATAGAT
TCGACCCAGT TTTCCATGGC TAACCAAGAT GTGCGTTATT ACCTCAATGG TTTATTGTTT
GAAACCGAAG GTAACACCTT AAAAGCCATT GCCACAGATG GTCACAGATT GGCATTAAGT
CATAGACAAA TAGACGTCAG CTTACCCGAG AAACAAGTGA TTGTGCCCCG TAAAGGTGTG
GTTGAAATGT CACGTTTATT AGATAGCGAT GATAAAGACA TCAGCATTGC CATTGGCGAG
AGCGCCATTC GTGCCGTTAC CGACACTGCA GTGTTCACCA GTAAGCTAGT GGATGGCCGT
TTTCCTGATT ATCGCCGCGT ATTACCTAAA GGCGGTGATA AAGTGGTGGT CGCCAGTCGT
CAGCAACTTA AACAGGCACT CACTCGCGCC TCTATTTTGT CTAATGAAAA GTTTCGCGGT
GTGCGTATTC AGTTGGAACC AGGCTTATTG CGGATAACGG CTAATAACCC TGAACAAGAA
GAAGCCGAGG AAATCATAGA CGTTGACTAT GATTCGGCAA ATCTTGAGAT TGGTTTTAAC
GTCAGTTACT TGCTAGATGT GCTTAATAAT TTAGCCAGCG AAGATGTGCG TATTACTCTT
ATAGACGGTA ATTCCAGCGC CTTGATAGAA AACCACAAGG AAGAAGATTC CATGTATGTG
GTGATGCCGA TGCGTTTATA A
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| Protein sequence | MKFSIDRDAL LKPLQLVTGA VERRHNLPIL ANLLVKVSQD VISLTGTDLE VELVGQAAIH
GDIVPGNTTV PAKKLLDIVK SLPEQSELHV EQQDNRWLLR SGRSRFTLAT LPASDYPNVE
AFQAEIEFTI KQGVLKSIID STQFSMANQD VRYYLNGLLF ETEGNTLKAI ATDGHRLALS
HRQIDVSLPE KQVIVPRKGV VEMSRLLDSD DKDISIAIGE SAIRAVTDTA VFTSKLVDGR
FPDYRRVLPK GGDKVVVASR QQLKQALTRA SILSNEKFRG VRIQLEPGLL RITANNPEQE
EAEEIIDVDY DSANLEIGFN VSYLLDVLNN LASEDVRITL IDGNSSALIE NHKEEDSMYV
VMPMRL
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