Gene Bxe_C1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1336 
Symbol 
ID4010848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1403324 
End bp1404733 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content58% 
IMG OID637953922 
Productmajor facilitator superfamily multidrug efflux transporter 
Protein accessionYP_556542 
Protein GI91781335 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC CCATGAGCCG CGATCAACGC GGTACTCTCG CCGCCGCAGG ACTGGGCTTT 
GTCGTCGTTT TGCTTGATGT CAGCGTTGTC AACGTTGCGC TCGATGCCTT GCGAGCCCGT
TTCGCCACCG ACGTGACCGG CCTGCAATGG GTTGTCAATG CATATACGCT AGCGTTTGCG
TCGCTACTCC TCACGACAGG CGCTTTAGGC GACCGCTTCG GCGCAAAGCG AATCTTCACC
GCAGGATTCG CAGTCTTTAC GCTGGCATCG ATCGGGTGTG GAATTGCCGA CTCATTGCCA
CTTCTTGTAG CGGCACGCGT CGTACAGGGC ATTGGCGCCG CGCTGCTGGT GCCCAATTCA
CTGGCCATGC TGCGCCAGGC GTTCCCGGAT ATGCAGCAAA GAAGCCGCGC TGTGGGCTGG
TGGGGCGCTG CGGGAGGAAT CGCGCTTGCC GCTGGACCGG TTTTGGGCGG CCTCCTGGTA
ACGCACGTGG GTTGGCGCAG CATTTTCCTG ATTAACCTGC CTATCGGCGT CGCGGGCGTG
GCACTTACTC TCCGTCACGC TGCAGCGGCC GTATCTACGC ATAATCGAAG CATTGATCTT
CCGGGCCAAC TGGCGGCTAT TGTCGCGTTG GTAGCATTGA CCGTGTGCCT TACAGAAGCG
GCCCGGCTCG GCTGGCGTCA CCCTTTGGTC TATGGTGCGC TGCTGCTTTC AGTGGTTGCC
ACCCTGGCTT TTCTTTGGCT GGAGTCACGA AGCACGGAGC CGATGCTCCC ATTGTCGCTG
TTTCGAACGG CTACGTTCTC TGTGGCGTCA GTCGCCGGCG TGATCGTGAA CTTTGCTTAC
TACGGTTTGA TCTTTGTTTT CAGTCTCTTC TTTCAAATAG AGCAGAACCT GTCAGCTCAA
TGGACCGGCC TCGCGTTTTT GCCCATGACA GCTGTTCTAA TGGGAGTGAA TATTCTGGCA
GGCCGGCTGC TCAACCGAAT CGGTGCAAAG AAACTCATGA TTGCCGGCAT GGTGATTGCC
GCGTCGGGTT ATCTGCTTCT GTTGCCGGTC AGCACAAACG GTTCGTACTG GATGCTGGTC
CTGCCAATGC TCGTTGCCGC AAGCGGCATT GCCCTGATGG TGCCAACCAT GACAAACGTC
ACACTGTCAT CTGTAGATGC CTCCCGCTCC GGTGTCGCGT CGGGAATACT CAACTCAGCG
AGGCAGGTCG GCGGCATGTT AGGGGTAGCG GTGTTCGGTT TTTTCGTACG CGATACCAGT
CATGATGGAT TTATGCAAGG CATGCATCTT TCCATCATGA CCGCCGCGGT GCTCCTGTTG
TGCGGCAGCG TGATATGCCT GTACGGAATT AGAACGCCGC GGCCCGCGCA CGTTGAGACC
AATCCCAAGG TTCTGGCCTC TGACAGTTAA
 
Protein sequence
MNMPMSRDQR GTLAAAGLGF VVVLLDVSVV NVALDALRAR FATDVTGLQW VVNAYTLAFA 
SLLLTTGALG DRFGAKRIFT AGFAVFTLAS IGCGIADSLP LLVAARVVQG IGAALLVPNS
LAMLRQAFPD MQQRSRAVGW WGAAGGIALA AGPVLGGLLV THVGWRSIFL INLPIGVAGV
ALTLRHAAAA VSTHNRSIDL PGQLAAIVAL VALTVCLTEA ARLGWRHPLV YGALLLSVVA
TLAFLWLESR STEPMLPLSL FRTATFSVAS VAGVIVNFAY YGLIFVFSLF FQIEQNLSAQ
WTGLAFLPMT AVLMGVNILA GRLLNRIGAK KLMIAGMVIA ASGYLLLLPV STNGSYWMLV
LPMLVAASGI ALMVPTMTNV TLSSVDASRS GVASGILNSA RQVGGMLGVA VFGFFVRDTS
HDGFMQGMHL SIMTAAVLLL CGSVICLYGI RTPRPAHVET NPKVLASDS