| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1308 |
|---|
| Symbol | |
|---|
| ID | 4010820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1377551 |
|---|
| End bp | 1379413 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637953895 |
|---|
| Product | branched chain amino acid ABC transporter ATPase/inner membrane protein |
|---|
| Protein accession | YP_556515 |
|---|
| Protein GI | 91781308 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.832531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.97267 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAGG TCAACGCGTC GCCAAACTGT GTCGGCGACG AATCTGCACA AGATCACGCC
CGCGTCAGCG AACAGCGAAA GATCCACGGG CGCGGGTGGA TCATGGTTGC CGGGTTCGCC
GCTGCGCTGC TAGCCGCAGG TCCGTTTGTT TTCGGTTCGT ATCTGCTGAA CATCCTGATT
CAGGCGTTCT TCTTCTCGAT CGTCGCTGTG ACAGTGGACG TCCTTTGGGG ATACACCGGA
TATCTGACGT TCGGGCAATC GGCGTTCTTT GGTCTTGGTG CCTACGCGGC GGGTCTGGTT
TTCACGCACG GCGGATTTTC GGCCGGTTAC GTCGTGGTGG CGCTTGGGGC AGCTATCGTG
GTGACAGGGG CGGTAGGTGG GCTGCTTGGC TGGCTATCCT TCTACCGAGG CGCGTCACCC
TTTTTTGCGA TAGTGATGTC ACTCGTGCTG CCGATCGTCC TCAGCCAATT GCTGCTGTCC
GGTGGGCAAT GGACGGGTTC GAGTTCCGGA CTGACCGGCT ATCCGACGTT CGATCTTTCT
CTCCAGGCCT GGTACTGGAT TGCCGGAGTG ACCTTGCTGG TGGTCGCAAC GCTGGCGTGG
CTGTTCGTGC GCAGTGACGG CGGCCGCGTA CTGGCGGCCA TTCGTGACAA CGAATCGCGC
GGTTCATACC TTGGTATCAA CACGTCGCTT GTCAAAATTA TCCTGCTTGC CGCGACTGCG
GTAATCGCCG GCCTTGCAGG GTTCGGCTAC GGATCGTTTA GCGGTGTGGT TGCACCTGAG
TTGACCGGGT TTGTCCTTGG CACCCAACTG ATCATCTGGG TCGCGCTTGG TGGGCGGGGA
ACGCTGTGGG GGCCGGTTAT CGGTGCGCTT CTGATCAACG TGGGAACTGC CTACCTCAGC
AGCAGCATGC CATTTGCGTG GCAACTCATT CTCGGCGCCG CGTTTGTAAT AGTGATCGTA
TTGGTGCCGC AAGGGCTGGT GCCGTTGCTA CTGAAGCCGT TCCGCCGCCT GGCTGGCAAC
GATGCTGAGC CTGAACTGGT CGAACGGGCC GTCCGGGTCC GCGACAAACA GCTAGCGTCC
GACCCTGCAT TGCAAATGCG CGGTGTTGCT AAACATTTCG GCAGTCTCAA GGTGCTGCAA
GGTATCGATC TGAACGCTAG CGGTGGCGAA CTGGTTGGTC TTATCGGTCC GAACGGCGCT
GGCAAGACGA CGCTCATGCG TTGCATGAGC GACGGTGCGG AGCGCTCTGC CGGTACGGTT
ATCCTGTGTG GTAACCCTAT CCGCCAGCTA CCGCCGGACC GGGGTGTGCG TTTCGGGTTA
GGGCGCAAGT TCCAGAACGC AAACATTTTT GAAACCCTCA CCGTGGCGGA ATGTTTGCGA
ATCGCGGGGA CGATCATCGA GCGACCTTCG CTCTTCCAAC GCTCGAAGAT CCTTGCGTTG
CCACCATACG CCATGGAGGT TGTCCGTACC ACCGGCCTTG ATCGGAAGCT GAGTGCGGTA
GCAAGGGATC TCTCACATGG GGAACAGCAG GCGTTGGAAC TGGCCATGGT GCTTGCGCTG
GAGCCGAGGA TCGTTTTGCT CGATGAGCCG ACGGCAGGAT TGACCAAAAC CGAGCGTACA
CAAATCGGCA ACGTGCTGGC CGCACTGGCT CACCAGTATC AGCTCTGTTG TCTGCTGGTG
GAACATGATC TCGACTTCGT CGCCGAAATA GCTACCCGCA TCGTAGTCCT GCATCAGGGA
CGTATTGTGA TGGACGGGAG CTTTGATGAC GTCGTCAATT CGGAGCTGGT CAGAACGATC
TACGCCGGAA CCGCGCAGGC CGGTGCGCCC GACGGGACCA CTTCACATCG GGAGGCTTCA
TGA
|
|---|
| Protein sequence | MAKVNASPNC VGDESAQDHA RVSEQRKIHG RGWIMVAGFA AALLAAGPFV FGSYLLNILI
QAFFFSIVAV TVDVLWGYTG YLTFGQSAFF GLGAYAAGLV FTHGGFSAGY VVVALGAAIV
VTGAVGGLLG WLSFYRGASP FFAIVMSLVL PIVLSQLLLS GGQWTGSSSG LTGYPTFDLS
LQAWYWIAGV TLLVVATLAW LFVRSDGGRV LAAIRDNESR GSYLGINTSL VKIILLAATA
VIAGLAGFGY GSFSGVVAPE LTGFVLGTQL IIWVALGGRG TLWGPVIGAL LINVGTAYLS
SSMPFAWQLI LGAAFVIVIV LVPQGLVPLL LKPFRRLAGN DAEPELVERA VRVRDKQLAS
DPALQMRGVA KHFGSLKVLQ GIDLNASGGE LVGLIGPNGA GKTTLMRCMS DGAERSAGTV
ILCGNPIRQL PPDRGVRFGL GRKFQNANIF ETLTVAECLR IAGTIIERPS LFQRSKILAL
PPYAMEVVRT TGLDRKLSAV ARDLSHGEQQ ALELAMVLAL EPRIVLLDEP TAGLTKTERT
QIGNVLAALA HQYQLCCLLV EHDLDFVAEI ATRIVVLHQG RIVMDGSFDD VVNSELVRTI
YAGTAQAGAP DGTTSHREAS
|
|---|
| |