Gene Bxe_C1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1307 
Symbol 
ID4010819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1376847 
End bp1377554 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID637953894 
Productbranched chain amino acid ABC transporter ATPase 
Protein accessionYP_556514 
Protein GI91781307 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.175129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.829874 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA TCGCGTTGGA CCTGCAGGAC GTCACCAGCG GATACAAAGC GTCGGTTGTG 
CTTCGCAAAC TGTCGATGAC CGTCGCAAAC GGCGAGGCCG TCGCGGTGCT TGGCAAGAAC
GGCATGGGCA AGACCACGTT GCTGAAGACA ATCATGGGCT ATCTGCCAAA GAAGGGCGGT
GCGATCCATG TACACGGAAG AGACATCACG CGTCTGCCGC CGCATCAGAT CGCGCGGGCA
GGCATTGCCT ATGCCCCTCA GGAACATGCG CTGTTTCAGG ATCTCAGCAT CCGTGACAAC
CTGCGTCTGG GGCTTTCCAA TGTATCCGTG TTCGAGGAAC GCTTTGCCGG GATCGAACCG
GTTTTCCCCG TCTTCAAAAG CCGTCTGCGC CAGTATGCCG GTACGCTTTC GGGTGGGGAA
CAGAAGATGC TGCTGGTAGC CCGTGCGCTC ATGACACGCC CCTCGATCAT CCTGCTCGAT
GAAATCACGG AAGGCTTGCA GCCGTCGGTG ATTGATCGCC TCGCCGACGC GCTGCTATGG
GAGCGCAAGC AGCACGGCAC CACTCTTCTG TTAATCGAGC AGAACGTTCC GTTCGCGCTG
AAGGTCGCAG ACCGGTATGC GGTGCTCAAG CAAGGCGAGG TCATCGAGCA CGGCAATGCG
AAGGACGAAA CGGCGGAGAC ATCGATCTTC GAACATCTGC TTGTCTGA
 
Protein sequence
MNQIALDLQD VTSGYKASVV LRKLSMTVAN GEAVAVLGKN GMGKTTLLKT IMGYLPKKGG 
AIHVHGRDIT RLPPHQIARA GIAYAPQEHA LFQDLSIRDN LRLGLSNVSV FEERFAGIEP
VFPVFKSRLR QYAGTLSGGE QKMLLVARAL MTRPSIILLD EITEGLQPSV IDRLADALLW
ERKQHGTTLL LIEQNVPFAL KVADRYAVLK QGEVIEHGNA KDETAETSIF EHLLV