| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1290 |
|---|
| Symbol | |
|---|
| ID | 4010802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1359097 |
|---|
| End bp | 1360824 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637953880 |
|---|
| Product | putative tannase and feruloyl esterase |
|---|
| Protein accession | YP_556500 |
|---|
| Protein GI | 91781293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.476626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGA AGCCCGCCGT TCATGAATTC CATGCCATGG GTTCCGCCCT GGCCCTTGCG
CCGCTGCTCA CGGTCTTTTC GCTAAGCGGT TGCGGCGACA ACCACCTCGA GTCGCCCGCG
GCGGCGCCTC TCAGCTGCTC GCAGCTCGCC GGCAAGAATG TGCCCGCGTC GTCCATCGGC
TTGCCCACCA CGGGGGCTAC GGTGACTGCG GCGACCGTGA TGCCTGCGTC GGGCTCGGGC
GTGCAGGCGA CCGGCGAATA TTGTCTCGTT AGCGCGGCGA TCAATCCGGT CGATCCGGCG
GCCCCGCAGA TCAAGTTGCA GATTGCAATG CCTACCGTCT GGAACAGCAA GATCATGATG
TTCGGCGGTG GCGGCTACGA CGGCACGATT CCCGCGCCCA CCGGCAACGT GCCGGCCGGC
CCGACCGCGC AGCCGACACC GCTCGGCCGC GGTTACGCGG TGTTCGCGAG CGACTCGGGG
CACGAGGCCA ATGCGCTCGG CAGCGAGGAT GGGTCGTTCG GTGTGAACGA CGAAGCCGTG
CAGAACTTTT CCGGCGACGC GCTGAAGAAA ACGCGCGATG TAGCCGTGTA CCTGATCGAC
GCGCGCTATG CTGTCAAGGC GCCGAAGCGG GCGTATTTCG CGGGAGGCTC GTCAGGCGGG
CGCGAGGCGC TCGCCGTCGT GCAGCGCTGG CCGCAGGACT GGGATGGATC GATCGTCCTG
TATCCGGCCT GGGCGGCCGC CAGCCTCGAT CTGCAGTTCG GGCGCATCAC GCGGGCGCTG
GCGGCGCCCG GCGCGTATCC CGATCAGGCC AAACGCAAAG TGCTGCTCGA CGCGGTGCTC
GCCAGCTGCG ATACGCTCGA CGGAGTCGCC GACGGTGTGA TCAGCAATGT CGCCGCGTGC
AACGCGACGT TCAATCCCGC CACTGCGACG CTCAACGGCA CGCCATTGCG TTGTGCCGGC
GGCGCGGACA CCGGCGATAG CTGCCTGTCC GACGCGCAGA TCACCGCGCT CAACGTGTAC
GACACGCCGA TCACGTTCGG CTACACGCTG GCGAGCGGCG AGACGCAATA CCCCGGCTTC
AACGTGTATG GCGCGGACCT GGGGGTGGCG AATGCTTCGG CGCTGCAGCC AACGGTGATC
ACGCTCGCGC TCGGCACGTC GCAGCCGGCT TCGCCGATGC CCAATACCGC GCCTTATCTC
AGCGTGTTCT GGGACCAATG GATACGTTAC TTCGTGACGC GCGACCCCAA CTACAATTCG
CTGAGCGTCG ATCCGCAGAA TCCCGGCAGC CTGCAGGCGC GCATCAGTCA ACTGACGGGT
TTGCAGGACG TCAACAAGAC CGACCTGTCG GCCTTCAATG CGAAAGGCGG CAAGATCCTG
ATGGCGCACG GCATGGCCGA CGCGCTCGTC AGCACGCGCT CGACCGAGCA GTACTATCAG
CGCCTGCAGG CGACGATGGG CACCTCCGCC GTTGCCAACT TTGTGCGCTA CTACGAAATT
CCCGGCTACG GGCATGCGGC CAGCACGGTT TATAACGCGG CGTGGGATTC GCTCACCACG
CTGGAAAACT GGGTCGAAAA AGGCGTGGCT CCGCCCGCGC AGATCGTCGC CGATACGGCT
GGCGTGCCGG GGCGTACACG GCCGCTGTGC GAGTACCCCA CCTTTCCGCG CTATAACGGT
TCCGGCGATA TGAACCTCGC GTCGAGCTTC ACTTGCGCGA GCCAGTAG
|
|---|
| Protein sequence | MQLKPAVHEF HAMGSALALA PLLTVFSLSG CGDNHLESPA AAPLSCSQLA GKNVPASSIG
LPTTGATVTA ATVMPASGSG VQATGEYCLV SAAINPVDPA APQIKLQIAM PTVWNSKIMM
FGGGGYDGTI PAPTGNVPAG PTAQPTPLGR GYAVFASDSG HEANALGSED GSFGVNDEAV
QNFSGDALKK TRDVAVYLID ARYAVKAPKR AYFAGGSSGG REALAVVQRW PQDWDGSIVL
YPAWAAASLD LQFGRITRAL AAPGAYPDQA KRKVLLDAVL ASCDTLDGVA DGVISNVAAC
NATFNPATAT LNGTPLRCAG GADTGDSCLS DAQITALNVY DTPITFGYTL ASGETQYPGF
NVYGADLGVA NASALQPTVI TLALGTSQPA SPMPNTAPYL SVFWDQWIRY FVTRDPNYNS
LSVDPQNPGS LQARISQLTG LQDVNKTDLS AFNAKGGKIL MAHGMADALV STRSTEQYYQ
RLQATMGTSA VANFVRYYEI PGYGHAASTV YNAAWDSLTT LENWVEKGVA PPAQIVADTA
GVPGRTRPLC EYPTFPRYNG SGDMNLASSF TCASQ
|
|---|
| |