| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1277 |
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| Symbol | |
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| ID | 4010789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1339724 |
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| End bp | 1342147 |
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| Gene Length | 2424 bp |
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| Protein Length | 807 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637953867 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_556487 |
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| Protein GI | 91781280 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.912371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.18237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGC AGAATAGGAA TGTACGAATG ACAGCGCAGG CACCGGACGC CACGCAATGG
GAGGCCAACG ACGACTGGGC CCGGCAATGG GTTGCGTCCA CTGTGGACTA CTCCGTTTTT
CGTATCACGA CCGACGGCAG GATTGCCAGC TGGAACGAGG GTGGTATCCG GATCGAGGGC
TACCGGCCGG CGGAAATCAT CGGGCAGCAT TTCTCCGTTC TCTACACCGA TGACGACCGC
CGGGACGGCA TCCCCGAAGC AGTGATGGAG AGCGCCCGGC GCCACGGACG TCACGACTCG
GAAGGATGGC GCCAGCGCGG GGATGGCGGG ACGTTCTGGG CAAGCGTGGT GACTACCGCC
CTTCGCGACC GGCGGGGCGA GTTCAGCGGA GCGGTACAGG TAGTGCGCGA TGTGAGCGAG
AACCGCCGGT CACACGAGGC CGTGATTGAA AGCGAACGGC GTTTCCGGCT GCTGGTGCAG
GGCGTGACGG ATTACGCGAT CTTCATGCTC TCGCCCGAAG GCTGCGTGAC GAACTGGAAC
AGCGGCGCGC GGCGGATCAA GGGCTACACC GAGGAAGAGA TCGTCGGTTC TCATTTTTCC
CGCTTCTATA CGCCGGAAGA CGCCGCGGCC GGCTTGCCGC AGCGCGGTCT GCAAGCCGCG
GCCCGCGACG GTCGCTTCGA GGCGGAAGGC TGGCGGGTCC GCAGCGACGG GACGACCTTC
TGGGCCCATG TGGTGATCGA TGCAATCTAC GAAGACGACG GCACGTTGCT CGGCTTCGCG
AAGATCACGC AGGACATCAC CGAGCGCCGT CAGGCGCACG AGCTTCTGGA AAAGACCCAG
GCCGCGCTGT TCCAGGCGCA AAAAATGGAA GCGATCGGCA AGCTGACGGG CGGCGTCGCC
CACGACTTCA ACAACGTATT GCAGGTGCTG CGAGGCAATC TCGAACTACT CGAAAACAGG
CATAGCCGGG ACGTCTGGAG CAGGGAGCGG CTCGCTCACG CCATCGATGC CGTCGAGCGC
GGCGCCAAAC TGGCGTCGCA ACTTCTCGCA TTTGGCCGGC GCCAGGCGTT GCGCCCCGTT
GTCGTCAACC TGGCCGCGAT GGTGCGCGGG ACGGACAGCA TGCTCGCCCG CGCGCTCGGC
GAGACGATCA ATGTCGAAAC GGTCGTTGCC GCCGGACTAT GGAATACGCT GGTGGACACC
CACCAGCTTG AAAATGTGTT GCTGAACCTG GCGATCAACG CGCGCGACGC GATGCCCGGA
GGCGGCCGTC TCACCATTGA ACTGGCCAAC GCAATGCTGG ACGACCGGTA CGTGCGGCCA
CTATCGGACG TGCCCGCGGG GCAGTACGTC ATGCTGGGAG TGACGGACAC GGGCATCGGC
ATGCCGCCGG AGATCGTCGA GCGTGCCTTC GATCCATTCT TCACGACCAA GCCGGAGGGG
CAGGGCACGG GGCTCGGCCT GAGCATGGCT TATGGCTTCG TCAAGCAGAG CGGCGGACAC
ATCAGGATCT ACAGCGAAGT GGGGCATGGC ACGACGGTCC GGATCTATCT GCCGAGATCC
ATGGATACCG CAGTCGATCT GCTGGCAAGA CACGAGCACC CGGTGAAGGT GGGCGGCCGC
GAGACCATCC TGGTGGTGGA AGACGACGCG AACGTTCAGT CGACGGTCGT CGATATGCTG
ACGGAACTGG GTTATTCCGT TCTCAAGGCC GACAATGCGG AGCAGGCGCT GACCGTGCTG
CGTAGCGGCA TTCACATCGA CGTGCTGTTC ACGGACGTCG TCATGCCCGG TCCGCTGCGC
AGTCCTGAAA TGGCCCGCCA GGCTGCGTTG CTGCTGCCGC ACCTGAAAAT CCTGTTCACC
TCCGGCTATA CGCAGAATGC GATCGTGCAT GCAGGACGGC TGGACGCCGG TGTCGAACTG
CTCAGCAAGC CCTATAGTCA GGAAGAACTG GCCCACAAGC TGCGCTACAT TCTCGGCACA
CCCGGGGAAG CGATTGCCGC GACCGCCGGC AGTGGCGACA CCGTGCAAGC CGGTGCAGTC
CCGGTGCCGG AAGGACCATT GCATATCCTC GTGGCCGAAG ACGACACCGA CTCTCTGGAT
GCGGCCTGTG AAATTCTCCA GATGCTCGGC CACGATGCCG CGAAGGCCAC CGACGCGACG
CAGGCGATGG AGCGGCTGCG CGCCAGGCGC TTCGATGTCC TGCTGACTGA TCTGAACCTG
CCCGGCGCCT CCGGGATCGA ACTCGCGAAA CAGGCGGTGG CGGTGCATCC GCGTCTGCAC
GTGGTGTTTG CATCAGGAGA CGAATTGCCG GACAACGTGT TGTTCGACTT CTCACACAAC
AGATTGCGCA AGCCCTACGC GGTGAACGAG CTTGACGATG TGCTTCGGGC GATTCAGCGC
GCATTGCACG CTGCCGGCCG TTAA
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| Protein sequence | MDTQNRNVRM TAQAPDATQW EANDDWARQW VASTVDYSVF RITTDGRIAS WNEGGIRIEG
YRPAEIIGQH FSVLYTDDDR RDGIPEAVME SARRHGRHDS EGWRQRGDGG TFWASVVTTA
LRDRRGEFSG AVQVVRDVSE NRRSHEAVIE SERRFRLLVQ GVTDYAIFML SPEGCVTNWN
SGARRIKGYT EEEIVGSHFS RFYTPEDAAA GLPQRGLQAA ARDGRFEAEG WRVRSDGTTF
WAHVVIDAIY EDDGTLLGFA KITQDITERR QAHELLEKTQ AALFQAQKME AIGKLTGGVA
HDFNNVLQVL RGNLELLENR HSRDVWSRER LAHAIDAVER GAKLASQLLA FGRRQALRPV
VVNLAAMVRG TDSMLARALG ETINVETVVA AGLWNTLVDT HQLENVLLNL AINARDAMPG
GGRLTIELAN AMLDDRYVRP LSDVPAGQYV MLGVTDTGIG MPPEIVERAF DPFFTTKPEG
QGTGLGLSMA YGFVKQSGGH IRIYSEVGHG TTVRIYLPRS MDTAVDLLAR HEHPVKVGGR
ETILVVEDDA NVQSTVVDML TELGYSVLKA DNAEQALTVL RSGIHIDVLF TDVVMPGPLR
SPEMARQAAL LLPHLKILFT SGYTQNAIVH AGRLDAGVEL LSKPYSQEEL AHKLRYILGT
PGEAIAATAG SGDTVQAGAV PVPEGPLHIL VAEDDTDSLD AACEILQMLG HDAAKATDAT
QAMERLRARR FDVLLTDLNL PGASGIELAK QAVAVHPRLH VVFASGDELP DNVLFDFSHN
RLRKPYAVNE LDDVLRAIQR ALHAAGR
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