Gene Bxe_C1242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1242 
Symbol 
ID4010754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1296321 
End bp1297622 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID637953832 
Productmajor facilitator transporter 
Protein accessionYP_556452 
Protein GI91781245 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTT CCCACTCACC CCGAGAGCGA CGTTCGATGA ACCCATCCGC CGAAAACTCC 
GCCCGCGTTG TCGCGACGCA GGAGGGCGAT AGCCCGCGGC AACTCACCGC GCCGCTAACG
TTCTTCTTCG CCGCGGCGGT GGGCGTGATC GTGATGAACC TGTTTGCCGC GCAACCGTTG
ACCGCTGCGA TTGGCCGGAG TTTGCACCTT GCCCCCGGAT TAGCCGGCCT TGTCGCGATG
CTTGCGCAAC TCGGTTACGC AGCTGGCCTC GTGCTGCTGG TGCCCTTGTG CGATTTGCTG
GAAAACCGTC GCCTGATCGT GCAGACACTG ACGGGTTGTG CCGGTTTTCT TGCCATCGCG
ATGTTCGCTG ATTCGCGAGG CGTGTTTCTG GTCGCGGTAT TCCTCGCTGG CGCGACTTCC
AGCGTGATTC AGATGCTGGT GCCAATGGCG GCTTCGATGG CAGCGGAAAG CCATCGCGGA
AGGGCGGTCG GCAACGTGAT GAGCGGCCTG ATGCTTGGCA TCCTGCTGTC GCGCCCGACT
GCGAGCGTGA TCGCCGGGGC GATTGGCTGG CGCGCTTTCT ATGGCGTTGC TGCCGCGATC
GATGCGTTGC TCGCGGTGGT TCTCTACGTG AACCTGCCCG TGCGCCGGCC GCTTGTCGTG
ACGCGCTACC CGGCGCTGTT GCGCTCGCTG TGGACCTTGC TGCGGACCGA GCCGGTGTTG
CAACGCAATG CGGCATCGGC TGCGTTGGTG ATGGGGGCGT TCAGCGCGTT CTGGACCGCT
ATCGGCTTGC GGCTCGCGCA ACCGCCGTTC AGCTTCGATA TGAATCGCAT TGCGCTGTTT
GCACTCGCGG GCGCGGCGGG TGCGATCGTG ACGCCGCTTG CGGGGCGCGC GGGCGACCGC
GGGGCGGGCC GTAAAGCGCT CATTGCGGGC CATCTGACGA TGCTCATTGC CCTCGCGGCA
ATCGGTGCAG CCGGCGCTGA CTGGGGCGGC TTTTCGACGG GCGCGCATCC GGCGCTGGCG
GTTGCGTTGC TGGTCGCGGG CGCGGCTGCG CTCGATGCTG GCGTGGTGAC TGACCAGACG
CTAGGCCGAC GTGCGATCAA CCTGATGAAT CCCGCCGCGC GCGGGAGGCT TAATGGGCTG
TTTGTCGGGG TGTTTTTTGT CGGCGGCGCA TTGGGTGCGA TGTTTTCGGG GGCGGCATGG
TCGCTGGCCG GCTGGAGTGG TGTCTGCGCG GTAGGCTTCG TGTTCACCAG CGTCGCGTTC
GGTCTCAGGT TGATCGGAGT GGTTCGCGGC ACCGAGGTCT GA
 
Protein sequence
MAFSHSPRER RSMNPSAENS ARVVATQEGD SPRQLTAPLT FFFAAAVGVI VMNLFAAQPL 
TAAIGRSLHL APGLAGLVAM LAQLGYAAGL VLLVPLCDLL ENRRLIVQTL TGCAGFLAIA
MFADSRGVFL VAVFLAGATS SVIQMLVPMA ASMAAESHRG RAVGNVMSGL MLGILLSRPT
ASVIAGAIGW RAFYGVAAAI DALLAVVLYV NLPVRRPLVV TRYPALLRSL WTLLRTEPVL
QRNAASAALV MGAFSAFWTA IGLRLAQPPF SFDMNRIALF ALAGAAGAIV TPLAGRAGDR
GAGRKALIAG HLTMLIALAA IGAAGADWGG FSTGAHPALA VALLVAGAAA LDAGVVTDQT
LGRRAINLMN PAARGRLNGL FVGVFFVGGA LGAMFSGAAW SLAGWSGVCA VGFVFTSVAF
GLRLIGVVRG TEV