Gene Bxe_C1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1238 
Symbol 
ID4010750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1293456 
End bp1294166 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content66% 
IMG OID637953828 
Productputative racemase 
Protein accessionYP_556448 
Protein GI91781241 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.205483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTG TGGTCGCCGA TAACGCCGAT AAAGCAGTTA GCAAGCGCAT GCCGCGCCTC 
GCGCTGATCA ATCCGAACAC GTCCGAGGCG TCGACCCGGC TGATGGTTGG AATCGCCGCG
GCCGAAGCCG GTGAGACCGC GAGCATCGCA GGCTTCACCG CACGCTTCGG CAGCCCGTTG
ATCTCCTGCG AAGCGCACTT GCGGGTCGCC GCCGAGGCGG TGCTCGACTT GATTGACTCC
GGTGTTGCCG ATGGTTTCGA CGGCGTGATC ATTTCGGCAT TCGGCGACCC GGGTGTCGAA
GCGGTGAGGG CGCGCGTGCC GATGCCGGTG CTTGGCCTGG CCGAAGCGAG TCTGGCCGAA
GCCGCCGCGT TCGGCGGCAA GTTCGCCATC GGAACGACCA CGCCGCAACT GATCGACGCG
ATCGAACGCT ATGTGATGCG ACGCGGGTTC GGCGCGCAGC TGCGGGCAAT TCGCACCACC
AGCGGCGACT TCGCCGAAGT CATGGCGGAC GCCGAACGAA TGGAGGCGGC GCTGGCAGTG
GTGATCGAGA CCATCATCCA GCGCGACGAT GTGTGCTCCA TCATCATCGG TGGCGGACCG
TTGGCGGGCG CGGCGCGCAC GCTCGCGGTC GATTCGCCGA CGCGGATCAT CGAGCCGATT
CCGGCGGCGG TGCGCGGACT GCTCGCGCAA CTGAACGGAG CGCGAGTATG A
 
Protein sequence
MMRVVADNAD KAVSKRMPRL ALINPNTSEA STRLMVGIAA AEAGETASIA GFTARFGSPL 
ISCEAHLRVA AEAVLDLIDS GVADGFDGVI ISAFGDPGVE AVRARVPMPV LGLAEASLAE
AAAFGGKFAI GTTTPQLIDA IERYVMRRGF GAQLRAIRTT SGDFAEVMAD AERMEAALAV
VIETIIQRDD VCSIIIGGGP LAGAARTLAV DSPTRIIEPI PAAVRGLLAQ LNGARV