| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1229 |
|---|
| Symbol | |
|---|
| ID | 4010741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1282222 |
|---|
| End bp | 1283316 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637953819 |
|---|
| Product | tartrate dehydrogenase |
|---|
| Protein accession | YP_556439 |
|---|
| Protein GI | 91781232 |
|---|
| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACCT ATCGCATTGC AACCATTCCC GGCGACGGCA TCGGCAAGGA AGTCATACCC
GCTGGCGCGC AGGTCCTCGA AGCACTCGCC AGAACAAGCA AGTCGTTCGC ATTCGAGTTC
GAAAACTTCG GCTGGGGCGG TGACTACTAT CGCGAGCATG GCGTCATGAT GCCGGCTGAC
GGGCTCGATG CGATCCGCAA CAAGGACGCT ATCCTGTTCG GCTCGGCCGG CGACCCGGAC
ATTCCCGATC ACATCACGCT GTGGGGCCTG CGCCTGAAAA TCTGCCAGGG TTTCGACCAG
TACGCGAACG TCCGCCCGAC CCGCATCCTG CCGGGTATCG ACGGACCGCT CAAGCGCTGC
AAGCCGGGAG ATCTGAATTG GGTCATTGTC CGCGAAAACT CGGAAGGGGA ATATTCCGGC
GTGGGCGGCC GGGTCCACCA GGGCCATCCG ATCGAAGCCG CGACGGACGT GTCGATCCTG
ACCCGCGCCG GTGTCGAGCG GATCATGCGC TTTGCGTTCC GCCTCGCGCA ATCCCGTCCG
CGCAAGCTGC TGACGGTGAT CACGAAGAGC AACGCACAGC GTCATGCAAT GGTGCTGTGG
GACGAGATTG CGCTGGAAAT CTCGAAGGAG TTTCCGGACG TCAAATGGGA CAAGGAACTG
GTGGATGCGT CGACTGCACG CATGATCAAC CGGCCCGCGA CGCTCGACAC GATCGTCGCC
ACGAACCTGC ACGCCGACAT TCTCAGCGAT CTTGCCGCCG CGCTCGCCGG CAGTCTGGGG
ATTGCACCGA CCGGCAATAT CGATCCGGAA CGCCGCTATC CCTCGATGTT CGAGCCAATC
CACGGTTCTG CATTCGATAT CATGGGCAAG GGGCTCGCCA ATCCGGTCGG CACCTTCTGG
TCGGTCGTCA TGCTGCTCGA ACACCTGGGC GAATTCGACG CCGCGCAGCG CGTGATGCAG
GCAGTCGAAG CAGTGACCGC GGACACCTCG CTGCACACGG GCGATCTCGG CGGCACGGCA
ACGACCGCAC AGGTGACGGC CGCGGTTTGC GCGTTTATCG AGAACGCGGT CTCGTCGGCC
GCTCGTGCGG CCTGA
|
|---|
| Protein sequence | MKTYRIATIP GDGIGKEVIP AGAQVLEALA RTSKSFAFEF ENFGWGGDYY REHGVMMPAD
GLDAIRNKDA ILFGSAGDPD IPDHITLWGL RLKICQGFDQ YANVRPTRIL PGIDGPLKRC
KPGDLNWVIV RENSEGEYSG VGGRVHQGHP IEAATDVSIL TRAGVERIMR FAFRLAQSRP
RKLLTVITKS NAQRHAMVLW DEIALEISKE FPDVKWDKEL VDASTARMIN RPATLDTIVA
TNLHADILSD LAAALAGSLG IAPTGNIDPE RRYPSMFEPI HGSAFDIMGK GLANPVGTFW
SVVMLLEHLG EFDAAQRVMQ AVEAVTADTS LHTGDLGGTA TTAQVTAAVC AFIENAVSSA
ARAA
|
|---|
| |