| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1189 |
|---|
| Symbol | bphH |
|---|
| ID | 4010701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1246921 |
|---|
| End bp | 1247715 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637953781 |
|---|
| Product | 2-hydroxypenta-2,4-dienoate hydratase (BphH) |
|---|
| Protein accession | YP_556401 |
|---|
| Protein GI | 91781194 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
|---|
| TIGRFAM ID | [TIGR03220] 2-oxopent-4-enoate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.375643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAACG CCATGACCCC TGAACTGATC GGAACGCTGG GTGACGAGCT CTACAGCGCG
CTGTGCACGC GCACCGTGGT CGAGCCGTTG ACCAGCCGCC ATCCAGAGAT CACCGTCGAG
GACGCCTACC ACATTCAGCA ACGGATGATC TCGCGCCGTC TGCAGGCCGG CGAGCGCGTC
GTCGGCAAGA AAATCGGCGT TACCAGCGCG GCCGTGATGA ACATGCTGGG CGTCTACCAG
CCCGACTTCG GCTACATGCT GGACGGCATG ATCGTCAGCG ACGGCGGCAG CATCGCCATG
TCCTCCCTGA TCCAGCCCAA GGCCGAAGGG GAAATCGCCT TTGTCCTGAA AAAGGACCTC
ATGGGTCCCG GCGTCACCAA CGCCGACGTG CTGGCTGCCA CCGACTTTGT CATGCCCTGC
TTCGAGATCG TTGACTCGCG CATCGGCGAC TGGAAAATCA AGATCCAGGA CACCGTGGCC
GACAACGCCT CCTGCGGCAT GTTCGTGCTC GGTAGCAGCG CCGCCGACCC GCGCAGGATC
GACCTGATGA CCTGCGGCAT GGTGCTCGAG AAAAACGGCG AGATCATCGC CACCGGCGCC
GGCGCCGCCG CCCTGGGCTC CCCGGTCAAT TCCGTGGCCT GGCTGGCCAA CACCCTGGGC
CGCCTGGGCA TCGGTCTGAA AGCCGGCGAG GTGATTCTCT CCGGCGCGCT GGCCGCCATG
TTCCCGGCCC AGGCCGGCGA CCATTTCCGC GTCACCATCG GCGGCATCGG CGGCTGCTCG
GTGCGCTTTC ACTGA
|
|---|
| Protein sequence | MRNAMTPELI GTLGDELYSA LCTRTVVEPL TSRHPEITVE DAYHIQQRMI SRRLQAGERV
VGKKIGVTSA AVMNMLGVYQ PDFGYMLDGM IVSDGGSIAM SSLIQPKAEG EIAFVLKKDL
MGPGVTNADV LAATDFVMPC FEIVDSRIGD WKIKIQDTVA DNASCGMFVL GSSAADPRRI
DLMTCGMVLE KNGEIIATGA GAAALGSPVN SVAWLANTLG RLGIGLKAGE VILSGALAAM
FPAQAGDHFR VTIGGIGGCS VRFH
|
|---|
| |