| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1166 |
|---|
| Symbol | |
|---|
| ID | 4010678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 1223297 |
|---|
| End bp | 1224082 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637953760 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_556380 |
|---|
| Protein GI | 91781173 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.448437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAGC TTCCGCAAGC CCAGCAGCCC CTTTACGCAC AGATCAAGAC CGCAATCGAA
CAACGCATTC AGGCAGATGA ATGGCGAGCC GATTTCCAGT TGCCGCGCGA GGAAGAACTC
GCCGTTGAAT TCGGCTCGTC CCGGCTGACA GTGCGCCGCG CCCTGAAGGA ATTGCAGGAC
GAAGGCTTGC TGGTCCGGAT TCAAGGGCGG GGCACCTTTG TCGTCGGCCC GCGCGTGCCA
TGCGCGATCT TCGATCTGCC CGATATCTCG GAAGAAATCG AATACAGCGG CGGCATCCAT
ACCAGCGAGG TGATTTCACT CCGGGCGCTG GACCGGGACG ATCCGCTGGC AAGCCTGCTG
CCCGTACCGG CAGGCGCGGT GCTGTTTCAC TCGCGCATCC TGCACAAGGA GGACGGCACG
CCGCTACAGG TCGAGGACCG CTTCGTCAAT TCGCTGGAGG CGCCCGCCTA TCTCGATCAG
GACTTCACCC GCGTGACTCC GCACGCCTAT CTGCTGTGCG AGACGGAAGT CACCGCGGTC
GAAAACAGCA TCCGGGCGGT GCGCGCGGAC CCCGAGAGCT TGCGGCTGCT CGAAATCGCG
GGCGACCAGC CGTGCCTGCT CATCGACCGG CGTACCTGGC GAGGCAAGGT ACCGGTAACG
CGCAGCCGCT TCCTTTACCC GGGCGATCGC TATCGCCTGC GCAGCTCGCA CGAGGCTGCC
ACGTCCAGCC GGCCGCCCAT GTCGGCGATG TTCGACATCA ACCCGTCCCC CCGGAGAATT
CGATGA
|
|---|
| Protein sequence | MPQLPQAQQP LYAQIKTAIE QRIQADEWRA DFQLPREEEL AVEFGSSRLT VRRALKELQD
EGLLVRIQGR GTFVVGPRVP CAIFDLPDIS EEIEYSGGIH TSEVISLRAL DRDDPLASLL
PVPAGAVLFH SRILHKEDGT PLQVEDRFVN SLEAPAYLDQ DFTRVTPHAY LLCETEVTAV
ENSIRAVRAD PESLRLLEIA GDQPCLLIDR RTWRGKVPVT RSRFLYPGDR YRLRSSHEAA
TSSRPPMSAM FDINPSPRRI R
|
|---|
| |