| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1163 |
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| Symbol | |
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| ID | 4010675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1219702 |
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| End bp | 1221408 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637953757 |
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| Product | thiamine pyrophosphate protein |
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| Protein accession | YP_556377 |
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| Protein GI | 91781170 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.256596 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAGCA GGACGAACAT GCGAAAAGGC AGTGAGATTC TCGCCGACGA GTTCTCACTC
AACGGGACCG ACCTCGTCTA TCACGTTCCC GGCGAAAGCT TTCTTTCCGC CCTCGACGCG
CTGGCGGTGC GCCATCCCGA GGTCCGGCTG ATCGCCTGCC GGCACGAGAA CGGCGCGGCG
CAGATGGCCG AAGCCTATGG GAAGCTGACG GCGCGGCCGG GCATCGCCTT CGTCACCCGC
AGCCCCGGCG CGACCAACGC GGTCAACGGT GTGCACACCG CCTTCCAGGA TGCGTCGCCG
ATGATCCTGG TGGTGGGGCA GGTCAAGCGC GCGCTCATGG AGCGCGAGGC CTTCATGTCC
TACGACTTCC GGGCGATGTT TGCGCCGATG GCCAAGTGGG TCGCGCAGAT CGACTGCGCC
GCGCGCATCC CGGAATTTGT CCAGCGTGCC TACCATACGG CGATGACCGG GCGCATGGGA
CCCGTGGTTC TCATTCTCCC GGAGGACGTG CTCGAAGAAG AAAGCGATGT CGCACCCGGC
AAACGGTATG TTCGCGCCCG GGCCGGCGAG CCGTCCAGCA GCCAGGTCGA TTCCATCTTC
GGCATGCTCG CCGAAGCCGC GCGTCCCTTG CTCGTCGTCG GCGGGTCGGG CTGGACCGAG
CGGGCGCGCG ACGACATCCA GGCTTTTGCG CAGGCAAACG GTGTGCCGGT CGTGACTACC
TTCAGGCGCC GCGACATCAT CGATCATCGC CTTCCGGTCT ACGCCGGCGA GATCGGAATC
GGCTCGAACC CCGCGCTGCT GACTCATGTA CGCGAGGCCG ATTTCGTGCT CATGTGCAAC
GATGCGCTGA GCGACGTCAA TACGATCGGC GCGGGCTACA TGGAGGGCTT CACGCTCTTC
GATATTCCCG TGCCCCGCCA GCGTTTCGTG CACGTCACGG GCAATTTCGA CGATCTGAAC
CGGGTTCATC AGGTCGACCT GGCAATCCTC GCGGACAACG ACGCGTTCGC GGCGGCGCTG
AGTCGCCACG AAGCAGTCGA CGCGAGCCGC CGCACGGAAT GGTTGGCGCG GCTGCGCAGC
AGCTTCGAGA TCGAAACCGC TCCGTCGCCG TGTGCCGGCC CAATCGATTT GCCGCGCGTG
ATGCAATGGC TGCGCGAGCG TTTGCCGGAC GACGCGATCG TCACTAATGG CGTGGGCGCG
TACGCCACCT GGAGCCAACG CTACTTTCCC CATTACCGGC TGCACACCCA GCTTGGTCCG
ATCAGCGGTT CGATGGGGTA CAGCCTGCCG GCCGCGATCT CCGCCAAGCT GCTTTATCCC
GAGCGCGTCG TGGTCGATGT CGTCGGGGAC GGCTGCTTCC AGATGAGCGG CGAGGAACTG
GCCACAGCCG TCCAGTACGG CGTCAATATC GTGGTCGTCA TCTTCAACAA TTCGATGTAC
GGCACGATCC GGATCCATGA GGAGAACCGG CTGAGCGGAC GGCGTCATGG GACCGACCTC
GTCAATCCGG ATTTCGCGGC GCTCGCGAGA GCCTATGGCG CGCATGCCGA GAAAGTCGTG
GCCACCGGGG AATTCGGCCC GGCCTTCGAA CGAAGCCTCG CCGCTGGAAA GCCAGCGGTG
ATCGAGTTGC TTGTCGATCC CGAGGCCATC CACACCCGCT ATTCGCTGAG CGATCTTCGA
AAACGCCGGG AAGCACGAGA ACACTGA
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| Protein sequence | MTSRTNMRKG SEILADEFSL NGTDLVYHVP GESFLSALDA LAVRHPEVRL IACRHENGAA
QMAEAYGKLT ARPGIAFVTR SPGATNAVNG VHTAFQDASP MILVVGQVKR ALMEREAFMS
YDFRAMFAPM AKWVAQIDCA ARIPEFVQRA YHTAMTGRMG PVVLILPEDV LEEESDVAPG
KRYVRARAGE PSSSQVDSIF GMLAEAARPL LVVGGSGWTE RARDDIQAFA QANGVPVVTT
FRRRDIIDHR LPVYAGEIGI GSNPALLTHV READFVLMCN DALSDVNTIG AGYMEGFTLF
DIPVPRQRFV HVTGNFDDLN RVHQVDLAIL ADNDAFAAAL SRHEAVDASR RTEWLARLRS
SFEIETAPSP CAGPIDLPRV MQWLRERLPD DAIVTNGVGA YATWSQRYFP HYRLHTQLGP
ISGSMGYSLP AAISAKLLYP ERVVVDVVGD GCFQMSGEEL ATAVQYGVNI VVVIFNNSMY
GTIRIHEENR LSGRRHGTDL VNPDFAALAR AYGAHAEKVV ATGEFGPAFE RSLAAGKPAV
IELLVDPEAI HTRYSLSDLR KRREAREH
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