| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1161 |
|---|
| Symbol | |
|---|
| ID | 4010673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1217664 |
|---|
| End bp | 1218623 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637953755 |
|---|
| Product | polar amino acid ABC transporter inner membrane protein |
|---|
| Protein accession | YP_556375 |
|---|
| Protein GI | 91781168 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.0329373 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACTA TCGATATCCA CGCCAGGGAA AAGAACAAGG CCGTCTTCGA GTCCGCGTCG
ACTTTCCGTC CTGAAGACGG CATTCCCGAT CACGAACTGG AAGTCCTCTC GGGGCGCAAG
TGGGGCAGGT GGCTCGCTGC AGTCATCATG GCGGTCCTGG CCGTCTGGCT GGGCTGGGGC
GTGGTCACCA ATCCGAACTT CCAGTGGGAC GTCGTCTTCC AGTATCTCAC CGCGCACGTC
GTGCTTAGCG GGCTGGGCCT GACACTTTGG CTCACGTGTG CCGCGATGGC GATCGGTATC
GTGCTCGGCA CACTGCTCGC CGTGATGCGC ACCTCGAGCA ATCCATTTCT GAGCGTGCCC
GCACAGCTTT ACCTGTGGTT CTTTCGCGGC ACGCCTGTCC TCGTGCAGCT TATCTTCTGG
TTCAATCTCG CGATTCTCAT TCCGCAGATT TCGATTGCAA TTCCCTTCGG ACCGGTTCTG
TTCCATGGCT CCGCCAATGA CCTGATTACG CCGTACACCG CGGCGTTGCT CGGCCTTGGG
CTTAACGAGG GAGCCTATAT GGCGGAGATC GTGAGGGCGG GAATTCTTTC CATCGACCCC
GGCCAGCAGG AGGCCGCGCG AGCACTCGGC ATGACGCCGG CGCGCATCCT CCGGCGCATC
GTATTGCCCC AGGCTATCCG GATCATCGTG CCGCCGGCGG GAAACGAGAC CATCGGCATG
TTGAAGACCA CGTCGCTGGT CAGCGTTATC GCGCTCTCGG ACCTGCTTTA TTCGGTGGAG
TCCGTCTCGT CGCGGACTTT CCAGACGATC CCGCTGCTGG TCGTCGCCTG CATCTGGTAT
CTCGTCGTCA CGAGTGTCCT TTCGCTGCTG CAATCGCGCA TCGAGCGGCA CCTCTGTCTG
ACCCGCCGGG CACGCAAAGC CGGCTCGTGG ATGCGCGTAT TCGGAGGAAT TGTTCGATGA
|
|---|
| Protein sequence | METIDIHARE KNKAVFESAS TFRPEDGIPD HELEVLSGRK WGRWLAAVIM AVLAVWLGWG
VVTNPNFQWD VVFQYLTAHV VLSGLGLTLW LTCAAMAIGI VLGTLLAVMR TSSNPFLSVP
AQLYLWFFRG TPVLVQLIFW FNLAILIPQI SIAIPFGPVL FHGSANDLIT PYTAALLGLG
LNEGAYMAEI VRAGILSIDP GQQEAARALG MTPARILRRI VLPQAIRIIV PPAGNETIGM
LKTTSLVSVI ALSDLLYSVE SVSSRTFQTI PLLVVACIWY LVVTSVLSLL QSRIERHLCL
TRRARKAGSW MRVFGGIVR
|
|---|
| |