| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1145 |
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| Symbol | |
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| ID | 4010657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | - |
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| Start bp | 1202795 |
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| End bp | 1204123 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637953740 |
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| Product | anibiotic ABC transporter efflux pump |
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| Protein accession | YP_556360 |
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| Protein GI | 91781153 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0950506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTG CCACACCGTT TCTGCTTTGC AGCCTGGTAT TTCCCGTTCT TGCCCATGGG
AGCGTCGATC TGGTCGACGC GGTCGATGCG GCCTTTGGCT ACGATTCCGG TATATCCAGC
GCGCGAAACG TGCAATCCGC CGGACACGAA AAGCGCTGGC AAGGCATCGC GGCCTTGCTT
CCCAATGCGC AGTTCGAAGC GCATGGCAGC AAACAGGACC AACCTGGCGC GGCCTATGCC
GCCGGAGTCC GGAAGCACGG CTATTCCTTC AGCGTCGTCC AGCCCATTTT CGACGGCTCC
AGGATAGCCG AGTTCAAGCG AGGCAAAGTA CTGTCTGAGC AGGCGGACAT CGACTTCGCC
AAAGCCCGGC AGAAGTTGAT TTACGACGTA TCGAACGCTT ACTTCGGTGT CCTGTTCCAG
CGAGAGGTAT TGCAGGCAGC GAAGGCCGCA AAGACTACCT TTGGAGAGCA ACTCAAGCAG
GCGACCATGG CCCTGTCCAT CGGGGAAGGG GCTCGCACCG ACGTCGACGA GGCGCAGGCC
AACTATGACC AGGCCAGCGC GCGGGAAATC AGCGCGCAGA ACAACCTTGA TTCGGCGGGC
ACGGCTTTTG GACGCCTGAC GGGACTTGGA AGCGAGGACC TGACGCCGTT CAACTGGTCG
TGCATGCCTG CGGGCGTACC GGTCGACGCC GCCACTGCGG AAGATCGGGC CGCGGACAAT
CTCGATGTCG TCAGCGCGGA ACTGCAAGTC GAGCAGAGCA AGGTGGACAA ACTGTCCGCC
GCCAGCTCCA ATCTGCCGGT TGTCTCCTTC CAGGCGAGCT ATGGCAGTAG CTGGAGCCAC
AACAACAGGC CAGAAACGTT AGGCGACATC CTGTTGGGTA CGAACTCGAA GTCGAAATCC
ACCATGGTGG GCATCGGCGT GACCATACCG CTGTTTTCCG GCGGGGCACA GTTGTCCTCG
GTACGGGAAG CAAGCCACCA CTACCGCGCC GCGCTCGACG CGCGGGAAGA TGCGCTGCGC
GAGGCACGGC AACGCGCCAG AGTGTCGTAC CTCGGCATCA TCAACGGCCT CGCTCTTGTG
CGAGCCCAGG AAAAAGTGCT GTCCTCCGCC GACAGCAAAG TGAAATCGAC GCGGCTTGGC
CGCGACGTCG GGCTGCGCAA CAGTATCGAT GTGCTCAACG CCGATCAGCA GTACTTCGAA
GCCGTACGGG ATCTCGCCGA CGCCCGCTAC AAATACCTTA AGTCGCATCT CGACTTCGAT
GTCGCGCTTG GCGCGCTGGA CAAGGCCAAT GTCGACGCTC TGGCGTGCCG GCCTCCGATC
GCCGAATGA
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| Protein sequence | MKIATPFLLC SLVFPVLAHG SVDLVDAVDA AFGYDSGISS ARNVQSAGHE KRWQGIAALL
PNAQFEAHGS KQDQPGAAYA AGVRKHGYSF SVVQPIFDGS RIAEFKRGKV LSEQADIDFA
KARQKLIYDV SNAYFGVLFQ REVLQAAKAA KTTFGEQLKQ ATMALSIGEG ARTDVDEAQA
NYDQASAREI SAQNNLDSAG TAFGRLTGLG SEDLTPFNWS CMPAGVPVDA ATAEDRAADN
LDVVSAELQV EQSKVDKLSA ASSNLPVVSF QASYGSSWSH NNRPETLGDI LLGTNSKSKS
TMVGIGVTIP LFSGGAQLSS VREASHHYRA ALDAREDALR EARQRARVSY LGIINGLALV
RAQEKVLSSA DSKVKSTRLG RDVGLRNSID VLNADQQYFE AVRDLADARY KYLKSHLDFD
VALGALDKAN VDALACRPPI AE
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