| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1142 |
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| Symbol | |
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| ID | 4010654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 1197624 |
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| End bp | 1199102 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637953737 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_556357 |
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| Protein GI | 91781150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.258577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.581397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAGTA TGAGCAGGAT CGCCGCGGTA AAGCTTCCCG CGCTGCTGGC CAGCGTCTGC
GCGCTCGCGG CGTGTTCCCT TGCGCCGGAC TACCATGTGC CGACGGCGCC GGTCGCCGCG
CAATACCACA CAGTGGGACC GTGGGTCAAC GCGCAGCCCG CGGACCAGTT AACGCGCACC
GACTGGTGGA ATATCTATAA CGACCCGCAA CTCGACGATC TCGAACAGCG TCTGCTCGCG
AACAATACCG ATCTTGCCGC GTCCTACGCC CATTACCGGC AGGCCATGGC ATTCGTCGAT
CAGGTCTCGT CGAATCTGTT CCCGCGGATC AGCGCGAGCG CGGTTCCGCA GCGTGACCGT
CAGTCCGACA CGCGGCCATT GCGCGCCGGC GGGCCCGATT ACTACAACTC GGCCACGCTC
GGCGGCGAAA TCGATTACGA CCTCGATCTA TGGGGCCGCG TGCGCGATTC CGTGGCGGCG
GGCAAGGATG AAGCGCAGGC CACCCAGGCC GATCTTGCCT CCGCGCAACT GAGCCTGCAG
GTTCAACTCG CCGACAGTTA TATCCGCCTG CGCGGGCTGG ACCAGCAAAC CCGGTTGCTG
ACCGACACCG TCGCGGCGTA CGCGCGCGCA TTGGAACTGA CGCAAACGCT GCATGGCGGA
GGGATTGTTT CGGGGCTCGA CGTATCGCGC GCGAGGACGC AGTTGTCGTC GACGAAATCG
CAGCTGTCGC AGAACCTTGC ACAGCGCGCG CTGATCGAGC ACGCGATCGC CGAGCTGATT
GGCGCGTCCG CATCCGAATT CAGTCTGGCG CCGAAAACCG CATTGATCGC ATTGCCGGTC
ATTCCGGTCG GCGTGCCGTC GACGTTGTTG CAACGACGTC CGGATATCGC GGCCGCCGAG
CGTCGCGTGG CGGAGGCAAA TGCGAAGATC GGCGTGGCAC GCGCCGCTTA TTTCCCGTCC
ATTACGCTGA GCTTGCAAGG CGGCGTCCAG AGCGCCGCGT ATGCCGGGTT GGTCAGCGCA
CCGAACATTT TCTGGGCGAT CGGTCCGCAA CTCGTGCAAT ACGTTTTCGA CGGCGGCTTG
CGCCGCGCGC AACTCGACTC GGCGAAAGCG GCCACCGACG AAGCGGGCGC GCGTTATCGC
GGCGTCGTGC TGTCGGCGTT CCAGCAAATC GAAGACAATC TTTCGCTGCT CCAGGACCTC
GGCACCGCGC TTGACCAGCA GCGCGATGCC GACGATTCGG CGCAGCACGC CGTCGACCTG
GCCTTGAACC GCTACCGGCA GGGCACGGTC GGCTATCTCG ACGTGGTACA GGCGCAGACG
GCGGCGCTCG ATGCACAACG CGGCGTGCTC GATCTCCAGA CCCGCTTGCT GAGCGCGAAC
GTGCAACTGG TCAAGGCGCT CGGCGGCGGC TGGTCGAGCC AGGAACTCGC GACCGCCGCG
CATGCTCCAG CCCTGGTCGC AGCCCGCGGT TCACCATGA
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| Protein sequence | MASMSRIAAV KLPALLASVC ALAACSLAPD YHVPTAPVAA QYHTVGPWVN AQPADQLTRT
DWWNIYNDPQ LDDLEQRLLA NNTDLAASYA HYRQAMAFVD QVSSNLFPRI SASAVPQRDR
QSDTRPLRAG GPDYYNSATL GGEIDYDLDL WGRVRDSVAA GKDEAQATQA DLASAQLSLQ
VQLADSYIRL RGLDQQTRLL TDTVAAYARA LELTQTLHGG GIVSGLDVSR ARTQLSSTKS
QLSQNLAQRA LIEHAIAELI GASASEFSLA PKTALIALPV IPVGVPSTLL QRRPDIAAAE
RRVAEANAKI GVARAAYFPS ITLSLQGGVQ SAAYAGLVSA PNIFWAIGPQ LVQYVFDGGL
RRAQLDSAKA ATDEAGARYR GVVLSAFQQI EDNLSLLQDL GTALDQQRDA DDSAQHAVDL
ALNRYRQGTV GYLDVVQAQT AALDAQRGVL DLQTRLLSAN VQLVKALGGG WSSQELATAA
HAPALVAARG SP
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