Gene Bxe_C1092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1092 
Symbol 
ID4010604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1137378 
End bp1137926 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content56% 
IMG OID637953689 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_556309 
Protein GI91781102 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATTC AGGTTAAACA CACAGAAATC CGCGATGTCA AGCTGATTGA GCCATGCATT 
CTCTCGGACA TGCGAGGCGT TTCGTTTGAC AGCTTCGATC AGGACGAATT CGAGGAACGT
GTGGCGCGCG GCTACCGGTT CGTGCAGGAG CGCCACTCGG TGTCTCTCCA TAATGTGCTG
TGCGGTCTTC ATTATCAGAT TCAACGCCCG CAAGGAAAAC TGGTACGAGT AGTAAACGGT
GAAGTGTTCG ATGTGGCGGT CGACTTGCGA CGCTGGTCGC CCACGTTCGG GCGCTGGATC
AGCGCGCGGC TATCGGCATC GAACTGTCGC CAGTTATGGA TCCCCCCAGG GTTTGCGCAT
GGTTTCCGGG TATTGTCGGA TGTCGCCGAG GTACTCTGCA AGACAACCGA GCGTGGCTTT
GTCGAGCATG AGCGCACATT GCAGTGGGAC GATCCTGATA TCGCGATTTC CTGGGATCTG
GACGAAGCTC CAATCACGTC CACGCGCGAT GCAGCAGGTA CAAGCTTCAG CACGGCGGAA
GTCTATTGA
 
Protein sequence
MAIQVKHTEI RDVKLIEPCI LSDMRGVSFD SFDQDEFEER VARGYRFVQE RHSVSLHNVL 
CGLHYQIQRP QGKLVRVVNG EVFDVAVDLR RWSPTFGRWI SARLSASNCR QLWIPPGFAH
GFRVLSDVAE VLCKTTERGF VEHERTLQWD DPDIAISWDL DEAPITSTRD AAGTSFSTAE
VY