Gene Bxe_C1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_C1087 
Symbol 
ID4010599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007953 
Strand
Start bp1131303 
End bp1131743 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID637953684 
Productprotein tyrosine phosphatase 
Protein accessionYP_556304 
Protein GI91781097 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.000390207 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGACA ACATCCTTGT TGTATGTGAA GGAAACGTCT GCCGAAGTCC GATGGCGCAA 
GGGTTGTTCG CAAAGCAGTT GCCCGGCGTC CGCGTGATGT CCGCCGGCTG GGCCGCGCTC
GTCGGCCGCC GCGCGGATCC CATCGCTGTC GCATTGATGG CAGAGCGTGG GATTGACATC
GCAAGCCATC TTGCCGCGAA CCTGAGCCTG CTCCACATAC GCTCGGCGGA ACTGGTTCTG
TCGATGACGC AGGAACAGCG CAGAAGGATC GAAACGAACT ATCCGTTCGC GAAGGGAAAG
GTCTATCGCC TCGGCGAGCA CGAGGGCACG GACGTATTGG ACCCATACCG CAAAGGACGC
GCGGCCTTCG AAATGGCCAT GACGCAGATC GAGCGCGGTG TGGCGCACTG GCTCGACGCA
ATGATTCGAT TGACTCACTA A
 
Protein sequence
MIDNILVVCE GNVCRSPMAQ GLFAKQLPGV RVMSAGWAAL VGRRADPIAV ALMAERGIDI 
ASHLAANLSL LHIRSAELVL SMTQEQRRRI ETNYPFAKGK VYRLGEHEGT DVLDPYRKGR
AAFEMAMTQI ERGVAHWLDA MIRLTH