| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1028 |
|---|
| Symbol | |
|---|
| ID | 4010541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | - |
|---|
| Start bp | 1063218 |
|---|
| End bp | 1064810 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637953628 |
|---|
| Product | putative AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_556248 |
|---|
| Protein GI | 91781041 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0219794 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATCGGA GAATGGAGAG CCATTCGGGA AGAGTAGTCG AGTGCTTCGC CGCGCGGCCG
CGGACGATAG ACGAGATGTT TCGCGCCGTC GTTGCACGAG CGGCCGATGC AGAAGCGCTT
GTCGATGGAA CAACCCGACT GAGCTACCGG GAACTTGATC GCCAGGTCGA CCGTCTTGCC
GACGCTCTGG CGGCAGCGGG CATCCAGGCC GGTGACCGCA TTGCCGTGAT GCTTTCGAAC
CGTCTGGAAG CTGTATTGTG CGTGCTAGCC ATCGCACGAG CACAGGGCAT ACTGGTGCCG
ATAGGTGAAC GTCTGCGCGC GCCTGAGGTT GCACATATCC TTCAAGATTC CCAGGCGATT
GCTCTAGTCT ATCAAGAGAC TTGTGAGCCA CAACTGCCGC CCGCTGAGGC TACGCCCTTA
TGTGCGGCGA GATTCTGCTG CGGAACAAGT CGCTGTGGAA ATCCCGCATT CGAACAGCTG
CTCGCGACGA GAGCGCAGGT TCAACAATTG CCGGTTCTCA CGGGTACGGT TGAGGATGAC
ATATTTGGAA TACTTTATAC CTCGGGAACG ACAGGAAGAC CCAAGGGCGC CACACTCACC
CATCTGAACG TTATTCATTC GTGCCTGCAC TGGGTCGATC GACTCGGCCT TGTGCAAGAA
GGCGAGCGCA GCGTTTTGTG TATTCCGTGG TCACATGTTG CGGGGCTGTG CGGAGTGGTG
TTCCCCCTTC TTTACCTGGG GGGAGCGCTC GTTCTCGTGA AAGAATTCAA CAAGCGCACC
TTTTTACGGC TTGCCTCGGA AGAGAGGATG TCGCATGCAT TGCTGGTGCC TGCCATGTAC
GGACTTTGCC TGCTCGATCC GGATCTACGG AGTTTTGATC TTTCGGCCTG GCGCATTGGT
GTCTACGGGA GCGCGCCCAT GCCGGAGGCG ACCATCCGGC GTTTTGCTGA AGCCGTCCCA
CACCTCGTCA TGTGTAATGC CTACGGCGCG ACAGAAACCG CGTCACCTGC AACGATCATG
CCACCCGGCG ATGGCCTCGA TCAGTCCGAT AGTATCGGAA AGGTAGTGGC GTGCGGTGAA
ATTCGCGTAA TGGACGAAAA CGGCTGCGAG ATGCCACCGG GCGAACCTGG CGAACTATGG
ATACGGGGAC CCATGATCGC CTCCGGCTAT TGGCGCAATC CGGAGGCGAC TGAAAGCGCA
TTCGTCGCCG GATTCTGGAA GTCCGGCGAC ATTGGCTCGG TCGACTCGCA AGGGTATGTG
CGCATTGCAG ACCGCAAGAA GGACATGATT AATCGTGGCG GGTTCAAGAT CTATCCAGCC
GAAGTCGAAA ACGTGTTGTG TGAGCTGGGC GGTGTGCTCG AAGTGGCTGT CGTGGGGCGG
CCGCACGTCA TACTCGGCGA GACGGTAGTG GCTTTCGTTC GCTGCGTGGA CGTCGATGTT
ACCGACGCGA TCGTGCGGGA ATTCTGCAGC GAGAAATTGG CGGATTACAA GATCCCGGAT
CATGTGGTGA TCGTGGAAGA ACCTCTTCCG CGTAACCCGA ATGGAAAGAT GCAGAAGGAG
ATGCTGCGCG AGATGGCTCG GGCTCTGCCG TAG
|
|---|
| Protein sequence | MHRRMESHSG RVVECFAARP RTIDEMFRAV VARAADAEAL VDGTTRLSYR ELDRQVDRLA
DALAAAGIQA GDRIAVMLSN RLEAVLCVLA IARAQGILVP IGERLRAPEV AHILQDSQAI
ALVYQETCEP QLPPAEATPL CAARFCCGTS RCGNPAFEQL LATRAQVQQL PVLTGTVEDD
IFGILYTSGT TGRPKGATLT HLNVIHSCLH WVDRLGLVQE GERSVLCIPW SHVAGLCGVV
FPLLYLGGAL VLVKEFNKRT FLRLASEERM SHALLVPAMY GLCLLDPDLR SFDLSAWRIG
VYGSAPMPEA TIRRFAEAVP HLVMCNAYGA TETASPATIM PPGDGLDQSD SIGKVVACGE
IRVMDENGCE MPPGEPGELW IRGPMIASGY WRNPEATESA FVAGFWKSGD IGSVDSQGYV
RIADRKKDMI NRGGFKIYPA EVENVLCELG GVLEVAVVGR PHVILGETVV AFVRCVDVDV
TDAIVREFCS EKLADYKIPD HVVIVEEPLP RNPNGKMQKE MLREMARALP
|
|---|
| |