| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1025 |
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| Symbol | |
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| ID | 4010538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007953 |
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| Strand | + |
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| Start bp | 1060520 |
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| End bp | 1061809 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637953626 |
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| Product | homogentisate 1,2-dioxygenase |
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| Protein accession | YP_556246 |
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| Protein GI | 91781039 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.243336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAC TCCACTACCA GAACGGCTTC GCTAACGAGC ATGAATCAGA GGCAAGTCCG
GGTACACTCC CCGTGGGCCG AAACTCGCCG CAGAGACCGG CGCACGGACT CTATACCGAA
CAGCTGAGCG GTACTTCATT CACCGCGGGT CGGTCGGAAT TCCGCCGCTC ATGGTTGTAC
AGGATCCGGC CGAGTGCCGC TCATGCGGAT TTCGTACCGG TCGACAACGC ACGTTATTTC
GAAGCCGGCT CAGCGTCCTT TGTTCCGAGC CGGTTTCGCT GGATGCCGCT GCCGCTACCC
ACAGGTTCCA CGAACTTCAT CGAAGGTCTG CACACGATGG CGATTGCCGG CAGCCCCGAA
TCGCGTGAAG GCGCCGCGTA TCATGTCTAT GCAGCCGCCA GTTCGATGGA CTTCGCTTTC
TCGAATCATG ATGCGGAAAT GCTTGTGTTT CCCCAGTCGG GCACACTCCG GGCAATTACC
GAATTCGGCG TTCTGGAAAT TGGGCCACAG GAGCTTTTGT TGATCCCACG CGGCGTCAAG
TTCCGGATTG AACTGCCGGA TGGGGCATCG CGCGGATACG TTTGCGAGAA TTTCGGTGCC
CATCTCCGGC TACCCGAACT TGGCCCGATC GGATCGAATG GCCTTGCAAA TGCGCGCGAT
TTTCAAGCGC CTACCGCATG GTTCGAAGAC GTCCGGCAAA CAACACGACT GCTAGTGAAA
TTCGCTGGCT CATTGTGGCA ATGCGATCTC GACCATTCTC CGTTCGACGT CGTCGCGTGG
CACGGCAATC TATGCCCGTA CAAGTACGAC ATGATGCGCT TCATGTCTAT CAACTCAGTA
AGCTATGACC ATGCCGATCC ATCGATTGGA GCCTTGTTGA CTTCGCCATC CGCTTTTACG
GGAACCCCCA ACTTTGAGAT AGCGATTTTT CCCCCAAGAT GGCTTGTGGC AGAGGACACA
TTTCGTCCTC CATGGTTCCA TCGCAACGTG ATGTGTGAGT TCGTGGGTGT TCTTAGCGGC
CTTCACGAAG CGCACGGTTC CGGTTTCCCA CCGGGCGCCT GCAGCCTGCA TAACTCATTC
GCGGCGCACG GACCCGATCC TGCGGTTTTC GAGCGCGCAT CCAGCGTCGC GCTGTCACCT
GAAAAACTGA GCGGCAGCAT ATTGGCAGTC TTCGAAACTC GCCTTCCCTG CCGGGTATCA
GCGTTCGCTC GTTCAACACC GCTGCGAAAA CCTGCGTATG ACGCCACGTG GGACACGCTG
CCACTAGTCA CCCCTCCAAA GTTCGCTTGA
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| Protein sequence | MDELHYQNGF ANEHESEASP GTLPVGRNSP QRPAHGLYTE QLSGTSFTAG RSEFRRSWLY
RIRPSAAHAD FVPVDNARYF EAGSASFVPS RFRWMPLPLP TGSTNFIEGL HTMAIAGSPE
SREGAAYHVY AAASSMDFAF SNHDAEMLVF PQSGTLRAIT EFGVLEIGPQ ELLLIPRGVK
FRIELPDGAS RGYVCENFGA HLRLPELGPI GSNGLANARD FQAPTAWFED VRQTTRLLVK
FAGSLWQCDL DHSPFDVVAW HGNLCPYKYD MMRFMSINSV SYDHADPSIG ALLTSPSAFT
GTPNFEIAIF PPRWLVAEDT FRPPWFHRNV MCEFVGVLSG LHEAHGSGFP PGACSLHNSF
AAHGPDPAVF ERASSVALSP EKLSGSILAV FETRLPCRVS AFARSTPLRK PAYDATWDTL
PLVTPPKFA
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