| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_C1009 |
|---|
| Symbol | |
|---|
| ID | 4010522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007953 |
|---|
| Strand | + |
|---|
| Start bp | 1046904 |
|---|
| End bp | 1047965 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637953612 |
|---|
| Product | vanillate demethylase |
|---|
| Protein accession | YP_556232 |
|---|
| Protein GI | 91781025 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0048453 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTTT TGCGCAATAC CTGGTACGCC GCGGGCTGGT CGCAGGATCT TGCAGCCGGC
GCAATGCTGG GGCGGACCAT GCTCAACGAA CAACTCGTGC TTTTTCGTGC GGACGACGGC
ACGGTATCGG CGCTATCGGA TATCTGTCCC CATCGTTTTG CCCCCTTGCA CCTCGGGAAG
ATCGTCGACG GCTGCCGCAT TCAGTGTGCT TATCACGCAC TCGAATTCGA TGGAACCGGC
GCGTGCGTGA AGAATCCGCA CGGCAAGCAG AAGATTCCGG CGGCGGCAAA GTTGCAGGCC
TATCCGGTCG TGGAAAAACA TTCGTTGATC TGGGTGTGGA TGGGTGAACA GGCGGCCGCC
GATCCGTCAG TCATTCCCGA CTTCAGCATG CTCGATCCTG ACTCGGGTTT TCAGGTAAGT
CGCCGCGACT GGCTTCACAT GGACGCGAGC TACGACCTGG TGGTCGACAA CCTGATGGAT
CTGAGTCACA CGGCGTTTCT CCACGACGGC ATCCTCGGCA GCAAATACAC GATCAAGGCG
GACACATCAC TGGAGCAAAC CGGTGAGACC GTGAAAGTTA CGCGCTTGAT GCCGAACGTC
CCTGTTCCCG GCTTCTTTGA TCTGATGTTC AATCGCGACG GCGGCATCGT CGACTATTGG
ACAGAGATCA GATGGAACCT GCCGGGCTGC CTGATGAACA ACACCGGTGT CACGCTTCCT
GGCGCACCGC GTTCAGAAGG GACAGGCGTC TATGGCATGC ATTTCCTGAC GCCGGAGACG
GATGTCAGCT GTTGGTATCA CTTCGCCGCA GTTCGCCAGA ACCCAAGAAC CTGGGGCGAA
CCTATCGACA CCGAGATAAA GGAAAAAATC TCCGATTTGC GCCGCTATGC GTTCGAGGAA
CAGGACCAGT GGATCATTAA AGCTCAGCAA CAAACGATCC TTCGTGCAAA AGGCAACTTG
CAGCCCGTTA GCCTCGAGAC CGACATTGGG ATTGAACGGT ATAAAAGAAT CCTGAAGGCC
GCGTTGGTTG CCGAACGATC GGGATCGACA ATGGCTGCCT GA
|
|---|
| Protein sequence | MEFLRNTWYA AGWSQDLAAG AMLGRTMLNE QLVLFRADDG TVSALSDICP HRFAPLHLGK
IVDGCRIQCA YHALEFDGTG ACVKNPHGKQ KIPAAAKLQA YPVVEKHSLI WVWMGEQAAA
DPSVIPDFSM LDPDSGFQVS RRDWLHMDAS YDLVVDNLMD LSHTAFLHDG ILGSKYTIKA
DTSLEQTGET VKVTRLMPNV PVPGFFDLMF NRDGGIVDYW TEIRWNLPGC LMNNTGVTLP
GAPRSEGTGV YGMHFLTPET DVSCWYHFAA VRQNPRTWGE PIDTEIKEKI SDLRRYAFEE
QDQWIIKAQQ QTILRAKGNL QPVSLETDIG IERYKRILKA ALVAERSGST MAA
|
|---|
| |