Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_C1003 |
Symbol | |
ID | 4010516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007953 |
Strand | - |
Start bp | 1038454 |
End bp | 1039602 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637953606 |
Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_556226 |
Protein GI | 91781019 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.437001 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTCT TCATAAAAAG CGTTATTGCT GCTTCGCTGC TGGCGTTGTC CACCTGCGTT CTGGCGCAGA TCAAGGTAGG CATTACCATT TCCGAGACGG GAGGCGCGGC ATCCATTGGC GCGATCTCAC GCAAGGTCTT TCCTTTATGG CCGCGTGAGA TTGCCGGTCA GTCCATCGAA TACATCGTGA TGGACGACGG CTCCGATCCG GGCAACGCCG TGCGCAACGC GCGCAAGCTG ACCAGCGAGG ACAAGGTGGA CGTGTTGATC GGTTCGAACA CCTCGCCGAA CTCGATCGCG ATGATTCCCG TTGCGCAGGA GACCGCGACG CCGCTGATTT CGCTGGCATC AGCCCTCGCG ATTGTCAGTC CCATGGACGC AGCACGGCAC TGGGTATTCA AGACCGTGCA GAACGACCAG AGCATGATCG ACGCCGTGCT GGCCGACATG TCCCGCCGCC ATGTCAAACG CCTGGGTTAC ATCGGTCTGG CCGATGCTAC CGGAGAGGGC TACCTGAAAG CGATTCAGGC AATGGCGCAA GGGCGCGGCA TCACTTTGGT GGATATTCAG AAATACAACC GTAACGATCA GAGCGTGGCA GCGCAAGGGC TGCGCCTGGT AGCGGCGAAC CCTGACGCGA TCTTTGTCGC CTCGCTGGGG ACATCGGCGG CATTGCCTCA ACTCGAGTTG GTCAATCGCG GCTACAAAGG GTTGATTTAC CACACGGGCG GCGTCGCAAA CGACGACTTC CTGCGTGTTG CCGGTTCTTC GGCTGAAGGC ATTTATCTTC CGCTGGGCGG CTTCCTGGTG GCCGGACAAT TGCCGGATTC GAACCCCACA AAACGCCTTT CGATGGACAT CGCGGCAGCC TACGAAAAGC AGAATGGCCC AAACACGCGT AACGTCTTTA TTTCGTATAC CTACGACGCG GTGCTGATGC TTCAGAACGC CATTCCTTCC GCGCTGAAAA AAGGCAAACC TGGGACACCC GCTTTCCGTT CGGCCCTGCG CGATGCGCTG GAGCAGATCA AGGACCTGGT GGCGACCAAC GGGGTGTACA CCATGTCGCC GACCGACCAC ACGGGTCTGG ATACACGATC CATTTTCATA GTGACGGTCA CGAACGGCAA ATGGGCACTG GCCCATTGA
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Protein sequence | MTLFIKSVIA ASLLALSTCV LAQIKVGITI SETGGAASIG AISRKVFPLW PREIAGQSIE YIVMDDGSDP GNAVRNARKL TSEDKVDVLI GSNTSPNSIA MIPVAQETAT PLISLASALA IVSPMDAARH WVFKTVQNDQ SMIDAVLADM SRRHVKRLGY IGLADATGEG YLKAIQAMAQ GRGITLVDIQ KYNRNDQSVA AQGLRLVAAN PDAIFVASLG TSAALPQLEL VNRGYKGLIY HTGGVANDDF LRVAGSSAEG IYLPLGGFLV AGQLPDSNPT KRLSMDIAAA YEKQNGPNTR NVFISYTYDA VLMLQNAIPS ALKKGKPGTP AFRSALRDAL EQIKDLVATN GVYTMSPTDH TGLDTRSIFI VTVTNGKWAL AH
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